RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 SPPL3Q8TCT6 385 aa18.53■□□□□ 0.56
TUBB3-205ENST00000554336 TMEM169Q96HH4 297 aa18.53■□□□□ 0.56
TUBB3-205ENST00000554336 TUBGCP2Q9BSJ2 902 aa18.53■□□□□ 0.56
TUBB3-205ENST00000554336 COQ4Q9Y3A0 265 aa18.53■□□□□ 0.56
TUBB3-205ENST00000554336 PCDHGC5Q9Y5F6 944 aa18.53■□□□□ 0.56
TUBB3-205ENST00000554336 MBTPS2O43462 519 aa18.52■□□□□ 0.56
TUBB3-205ENST00000554336 NCK2O43639 380 aa18.52■□□□□ 0.56
TUBB3-205ENST00000554336 AFPP02771 609 aaKnown RBP18.52■□□□□ 0.56
TUBB3-205ENST00000554336 PIK3CAP42336 1068 aa18.52■□□□□ 0.56
TUBB3-205ENST00000554336 TAF6P49848 677 aa18.52■□□□□ 0.56
TUBB3-205ENST00000554336 RBP5P82980 135 aa18.52■□□□□ 0.56
TUBB3-205ENST00000554336 DDX53Q86TM3 631 aaKnown RBP18.52■□□□□ 0.56
TUBB3-205ENST00000554336 POF1BQ8WVV4 589 aa18.52■□□□□ 0.56
TUBB3-205ENST00000554336 SUSD3Q96L08 255 aa18.52■□□□□ 0.56
TUBB3-205ENST00000554336 PI4K2AQ9BTU6 479 aa18.52■□□□□ 0.56
TUBB3-205ENST00000554336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.52■□□□□ 0.56
TUBB3-205ENST00000554336 MAGEC2Q9UBF1 373 aaPredicted RBP18.52■□□□□ 0.56
TUBB3-205ENST00000554336 LIMA1Q9UHB6 759 aaKnown RBP18.52■□□□□ 0.56
TUBB3-205ENST00000554336 FAM50BQ9Y247 325 aa18.52■□□□□ 0.56
TUBB3-205ENST00000554336 SF3B1O75533 1304 aaKnown RBP eCLIP18.51■□□□□ 0.553e-6■■■■■ 137.9
TUBB3-205ENST00000554336 C19orf67A6NJJ6 358 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 SMTNL1A8MU46 457 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 BECN2A8MW95 431 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 M0QZQ0 153 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 PHACTR2O75167 634 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 TADA2AO75478 443 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 ASS1P00966 412 aaKnown RBP18.51■□□□□ 0.55
TUBB3-205ENST00000554336 ERVFC1P60507 584 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 ADAM15Q13444 863 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 SMAD2Q15796 467 aaKnown RBP18.51■□□□□ 0.55
TUBB3-205ENST00000554336 RTP2Q5QGT7 225 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 SPOPLQ6IQ16 392 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 ADHFE1Q8IWW8 467 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 FBXL13Q8NEE6 735 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 LMO3Q8TAP4 145 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 HPDLQ96IR7 371 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 ZNF560Q96MR9 790 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 HERC2P3Q9BVR0 1158 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 ZBP1Q9H171 429 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 NDST4Q9H3R1 872 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 APOBEC3GQ9HC16 384 aaKnown RBP18.51■□□□□ 0.55
TUBB3-205ENST00000554336 PRKAG3Q9UGI9 489 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 LZTS1Q9Y250 596 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 NUB1Q9Y5A7 615 aa18.51■□□□□ 0.55
TUBB3-205ENST00000554336 CARNS1A5YM72 827 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 PRR33A8MZF0 331 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 KPNA7A9QM74 516 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 PMM2O15305 246 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 STX10O60499 249 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 STAU1O95793 577 aaKnown RBP18.5■□□□□ 0.55
TUBB3-205ENST00000554336 SOD2P04179 222 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 ALADP13716 330 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 PRKCSHP14314 528 aaPredicted RBP18.5■□□□□ 0.55
TUBB3-205ENST00000554336 TKTP29401 623 aaKnown RBP18.5■□□□□ 0.55
TUBB3-205ENST00000554336 COPB1P53618 953 aaKnown RBP18.5■□□□□ 0.55
TUBB3-205ENST00000554336 SV2CQ496J9 727 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 VWA3BQ502W6 1294 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 FAM171A1Q5VUB5 890 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 RBM23Q86U06 439 aaKnown RBP18.5■□□□□ 0.55
TUBB3-205ENST00000554336 VPS52Q8N1B4 723 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 AUTS2Q8WXX7 1259 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 SENP8Q96LD8 212 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 RBSNQ9H1K0 784 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 VRTNQ9H8Y1 702 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 CHST7Q9NS84 486 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 POLIQ9UNA4 740 aa18.5■□□□□ 0.55
TUBB3-205ENST00000554336 DCXO43602 365 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 FGFR3P22607 806 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 PNPLA4P41247 253 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 NRIP1P48552 1158 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 NDUFV1P49821 464 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 NOP14P78316 857 aaKnown RBP18.49■□□□□ 0.55
TUBB3-205ENST00000554336 TRPC3Q13507 836 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 ZNF699Q32M78 642 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 LIMS2Q7Z4I7 341 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 MSLNLQ96KJ4 702 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 VPS16Q9H269 839 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 RAB20Q9NX57 234 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 GDAP2Q9NXN4 497 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 CD207Q9UJ71 328 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 L1RE1Q9UN81 338 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 ARIH1Q9Y4X5 557 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-205ENST00000554336 TIMM13Q9Y5L4 95 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-205ENST00000554336 PLXNA3P51805 1871 aa18.49■□□□□ 0.55
TUBB3-205ENST00000554336 LRRC10BA6NIK2 292 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 FSCN2O14926 492 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 P4HA2O15460 535 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 GLP2RO95838 553 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 ATICP31939 592 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 ASPAP45381 313 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 APBA1Q02410 837 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 KRT17Q04695 432 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 UBE3AQ05086 875 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 SMAD4Q13485 552 aaKnown RBP18.48■□□□□ 0.55
TUBB3-205ENST00000554336 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-205ENST00000554336 CRACR2AQ9BSW2 395 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 SDCBP2Q9H190 292 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 TLR9Q9NR96 1032 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 CLEC1BQ9P126 229 aa18.48■□□□□ 0.55
TUBB3-205ENST00000554336 PCDHB8Q9UN66 801 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms