RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 MOSPD3O75425 235 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 NFICP08651 508 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 PSMC3P17980 439 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 RPS9P46781 194 aaKnown RBP20.32■□□□□ 0.84
CPSF2-203ENST00000554290 POSTNQ15063 836 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 PTPAQ15257 358 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 TEAD2Q15562 447 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 ZNF528Q3MIS6 628 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 RRAGBQ5VZM2 374 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 SV2BQ7L1I2 683 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 ZNF720Q7Z2F6 126 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 SFR1Q86XK3 245 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 ZSCAN18Q8TBC5 510 aaPredicted RBP20.32■□□□□ 0.84
CPSF2-203ENST00000554290 E2F7Q96AV8 911 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 CLDN23Q96B33 292 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 FBXO2Q9UK22 296 aaPredicted RBP20.32■□□□□ 0.84
CPSF2-203ENST00000554290 DSEQ9UL01 958 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 ASB3Q9Y575 518 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 ANO9A1A5B4 782 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 PIRO00625 290 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 VNN2O95498 520 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 FGF19O95750 216 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 CYP11A1P05108 521 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 GJA1P17302 382 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 GAP43P17677 238 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 TARSP26639 723 aaKnown RBP20.31■□□□□ 0.84
CPSF2-203ENST00000554290 GDI1P31150 447 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 VITQ6UXI7 678 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 METTL23Q86XA0 190 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 MAML2Q8IZL2 1156 aaPredicted RBP20.31■□□□□ 0.84
CPSF2-203ENST00000554290 SHKBP1Q8TBC3 707 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 POMGNT1Q8WZA1 660 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 MRPL44Q9H9J2 332 aaKnown RBP20.31■□□□□ 0.84
CPSF2-203ENST00000554290 TRPV5Q9NQA5 729 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 DPP3Q9NY33 737 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 HSFX1Q9UBD0 423 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 EXOC7Q9UPT5 735 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 SLC27A5Q9Y2P5 690 aa20.31■□□□□ 0.84
CPSF2-203ENST00000554290 RIF1Q5UIP0 2472 aaKnown RBP20.3■□□□□ 0.84
CPSF2-203ENST00000554290 MTMR11A4FU01 709 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 TISP43B9A030 160 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 NRG2O14511 850 aaPredicted RBP20.3■□□□□ 0.84
CPSF2-203ENST00000554290 ZNF263O14978 683 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 SPTLC1O15269 473 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 SYT1P21579 422 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 VIPR2P41587 438 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 CSTF1Q05048 431 aaKnown RBP20.3■□□□□ 0.84
CPSF2-203ENST00000554290 MFSD6LQ8IWD5 586 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 THEM5Q8N1Q8 247 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 ATAD1Q8NBU5 361 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 LRRC3Q9BY71 257 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 CRISPLD1Q9H336 500 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 ZNF334Q9HCZ1 680 aaPredicted RBP20.3■□□□□ 0.84
CPSF2-203ENST00000554290 CFAP54Q96N23 3096 aa20.3■□□□□ 0.84
CPSF2-203ENST00000554290 A0A1W2PRU2 124 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 KINO60870 393 aaKnown RBP20.29■□□□□ 0.84
CPSF2-203ENST00000554290 IL18RAPO95256 599 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 TUFMP49411 452 aaKnown RBP20.29■□□□□ 0.84
CPSF2-203ENST00000554290 TAF6P49848 677 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 CEBPZQ03701 1054 aaKnown RBP20.29■□□□□ 0.84
CPSF2-203ENST00000554290 RESTQ13127 1097 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 CCDC73Q6ZRK6 1079 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 ITIH5Q86UX2 942 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 TMC8Q8IU68 726 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 YAF2Q8IY57 180 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 PSMG2Q969U7 264 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 CLIC6Q96NY7 704 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 ACCSQ96QU6 501 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 DNAJC25Q9H1X3 360 aa20.29■□□□□ 0.84
CPSF2-203ENST00000554290 MYMKA6NI61 221 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 HEPACAM2A8MVW5 462 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 CYB561D2O14569 222 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 FOXK2Q01167 660 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 VEPH1Q14D04 833 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 SLC39A12Q504Y0 691 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 DNAJB7Q7Z6W7 309 aaPredicted RBP20.28■□□□□ 0.84
CPSF2-203ENST00000554290 NT5DC4Q86YG4 428 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 ATRIPQ8WXE1 791 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 INTS4Q96HW7 963 aaKnown RBP20.28■□□□□ 0.84
CPSF2-203ENST00000554290 TMEM209Q96SK2 561 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 PYM1Q9BRP8 204 aaKnown RBP20.28■□□□□ 0.84
CPSF2-203ENST00000554290 STRA6Q9BX79 667 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 NDRG2Q9UN36 371 aaKnown RBP20.28■□□□□ 0.84
CPSF2-203ENST00000554290 PCDHB13Q9Y5F0 798 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 PCDHGA2Q9Y5H1 932 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 COL4A3Q01955 1670 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 FAM186AA6NE01 2351 aa20.28■□□□□ 0.84
CPSF2-203ENST00000554290 VPS13AQ96RL7 3174 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 PPP1R37O75864 691 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 ADSSP30520 456 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 SMARCB1Q12824 385 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 SV2CQ496J9 727 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 ARHGAP15Q53QZ3 475 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 L1TD1Q5T7N2 865 aaKnown RBP20.27■□□□□ 0.84
CPSF2-203ENST00000554290 FAM173BQ6P4H8 233 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 CRELD2Q6UXH1 353 aaPredicted RBP20.27■□□□□ 0.84
CPSF2-203ENST00000554290 TTC9BQ8N6N2 239 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 OR10T2Q8NGX3 314 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 FAM200AQ8TCP9 573 aa20.27■□□□□ 0.84
CPSF2-203ENST00000554290 CSGALNACT1Q8TDX6 532 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms