RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 DDX47Q9H0S4 455 aaKnown RBP13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 DPP3Q9NY33 737 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 TJP2Q9UDY2 1190 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 O00370 1275 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 DUSP11O75319 330 aaKnown RBP13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 FGGP02679 453 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 GLI1P08151 1106 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 CTSHP09668 335 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 HADHBP55084 474 aaKnown RBP13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 NBPF20Q3BBV1 942 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 C11orf63Q6NUN7 778 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 C8orf74Q6P047 294 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 SLC27A1Q6PCB7 646 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 ZNF677Q86XU0 584 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 SH3BP1Q9Y3L3 701 aa13.58□□□□□ -0.24
VIPAS39-206ENST00000553888 PGRMC1O00264 195 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 CD19P15391 556 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 GRM5P41594 1212 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 PTP4A2Q12974 167 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 FAM47CQ5HY64 1035 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 GDF6Q6KF10 455 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 WDR93Q6P2C0 686 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 DPH6Q7L8W6 267 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 WDTC1Q8N5D0 677 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 WHAMMQ8TF30 809 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 HPDLQ96IR7 371 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 RNPC3Q96LT9 517 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 ERVK-5Q9HDB9 667 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 ADAM22Q9P0K1 906 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 RAD51CO43502 376 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 SPOPO43791 374 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 MTA2O94776 668 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 ITIH3Q06033 890 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 CYP4A22Q5TCH4 519 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 DENND1BQ6P3S1 775 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 ACTRT1Q8TDG2 376 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 ELOVL4Q9GZR5 314 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 ASB7Q9H672 318 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 TMEM59LQ9UK28 342 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 RECQL4O94761 1208 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 PLA2G4AP47712 749 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 CDR1P51861 262 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 RAD23BP54727 409 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 IRF5Q13568 498 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 TCEAL1Q15170 157 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 MFSD14CQ5VZR4 134 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 NOTUMQ6P988 496 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 RASGEF1CQ8N431 466 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 BCO2Q9BYV7 579 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 TRIM6Q9C030 488 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 CYTH4Q9UIA0 394 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 Q9Y3F1 56 aa13.57□□□□□ -0.24
VIPAS39-206ENST00000553888 TCRBV7S2A1N4TA0A589 114 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 KRIT1O00522 736 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 HCRTO43612 131 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 RPL7AP62424 266 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 CD101Q93033 1021 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 CAPNS2Q96L46 248 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 GOLGA2P5Q9HBQ8 144 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 RNF14Q9UBS8 474 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 TARSL2A2RTX5 802 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 PYGMP11217 842 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 PEX5P50542 639 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 GJA9P57773 515 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 TUBB4BP68371 445 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 ZDHHC14Q8IZN3 488 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 ARRDC4Q8NCT1 418 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 SNX27Q96L92 541 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 CELF4Q9BZC1 486 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 UVRAGQ9P2Y5 699 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 CACNG4Q9UBN1 327 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 L1RE1Q9UN81 338 aa13.56□□□□□ -0.24
VIPAS39-206ENST00000553888 MEIS3P2A8K0S8 358 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 CES2O00748 559 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 TRPA1O75762 1119 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 HEXIM1O94992 359 aaKnown RBP13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 IBSPP21815 317 aaPredicted RBP13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 HTRA3P83110 453 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 GUCY2DQ02846 1103 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 MAMLD1Q13495 774 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 DCAF4L1Q3SXM0 396 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 CCNI2Q6ZMN8 369 aaPredicted RBP13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 SESTD1Q86VW0 696 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 SLC4A11Q8NBS3 891 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 LPIN3Q9BQK8 851 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 KATNAL1Q9BW62 490 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 STIM2Q9P246 746 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 TCF4P15884 667 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 IGFBP6P24592 240 aaPredicted RBP13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 HOXC8P31273 242 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 FAM228AQ86W67 206 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 HNRNPLLQ8WVV9 542 aaKnown RBP13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 EPB41L5Q9HCM4 733 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 PARP2Q9UGN5 583 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 AMACRQ9UHK6 382 aa13.55□□□□□ -0.24
VIPAS39-206ENST00000553888 NME7Q9Y5B8 376 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms