RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 HOOK1Q9UJC3 728 aaKnown RBP25.47■■□□□ 1.67
TDP1-205ENST00000553527 DOCK8Q8NF50 2099 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 LRG1P02750 347 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 TMEM191BP0C7N4 346 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 FSHRP23945 695 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 CDR1P51861 262 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 PSMD2Q13200 908 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 TPGS2Q68CL5 300 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 C1orf127Q8N9H9 656 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 MYADMQ96S97 322 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 MTMR12Q9C0I1 747 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 KIAA1586Q9HCI6 787 aa25.46■■□□□ 1.67
TDP1-205ENST00000553527 KPNA7A9QM74 516 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 TYMPP19971 482 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 PAX3P23760 479 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 HOXA9P31269 272 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 SNRNP35Q16560 246 aaKnown RBP25.45■■□□□ 1.66
TDP1-205ENST00000553527 BMT2Q1RMZ1 405 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 SV2CQ496J9 727 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 METTL23Q86XA0 190 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 XXYLT1Q8NBI6 393 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 ST13P5Q8NFI4 369 aaPredicted RBP25.45■■□□□ 1.66
TDP1-205ENST00000553527 CCDC47Q96A33 483 aaKnown RBP25.45■■□□□ 1.66
TDP1-205ENST00000553527 ANKRD36BP1Q96IX9 119 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 SMOC2Q9H3U7 446 aa25.45■■□□□ 1.66
TDP1-205ENST00000553527 R3HCC1Q9Y3T6 440 aaKnown RBP25.45■■□□□ 1.66
TDP1-205ENST00000553527 TSC2P49815 1807 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 NOTCH4Q99466 2003 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 PAPLNO95428 1278 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 DLATP10515 647 aaKnown RBP25.44■■□□□ 1.66
TDP1-205ENST00000553527 BFSP1Q12934 665 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 SURF1Q15526 300 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 OR5B17Q8NGF7 314 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 CCDC127Q96BQ5 260 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 ZNF560Q96MR9 790 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 TMEM209Q96SK2 561 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 DNMT3BQ9UBC3 853 aaKnown RBP25.44■■□□□ 1.66
TDP1-205ENST00000553527 AFF4Q9UHB7 1163 aaKnown RBP25.44■■□□□ 1.66
TDP1-205ENST00000553527 RAPGEFL1Q9UHV5 662 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 SORCS3Q9UPU3 1222 aa25.44■■□□□ 1.66
TDP1-205ENST00000553527 PTPRJQ12913 1337 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 ARHGEF37A1IGU5 675 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 OR6C75A6NL08 312 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 EXOC3O60645 756 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 TNNC2P02585 160 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 SNRPFP62306 86 aaKnown RBP25.43■■□□□ 1.66
TDP1-205ENST00000553527 DPYDQ12882 1025 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 WSCD1Q658N2 575 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 TRIM67Q6ZTA4 783 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 TCEAL8Q8IYN2 117 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 BORCS6Q96GS4 357 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 OXCT2Q9BYC2 517 aaPredicted RBP25.43■■□□□ 1.66
TDP1-205ENST00000553527 INTS13Q9NVM9 706 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 ITGA11Q9UKX5 1188 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 MAPK8IP1Q9UQF2 711 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 TECTAO75443 2155 aa25.43■■□□□ 1.66
TDP1-205ENST00000553527 PRR33A8MZF0 331 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 TNNI1P19237 187 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 COL9A1P20849 921 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 PNPLA4P41247 253 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 RBP5P82980 135 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 PNOCQ13519 176 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 MTMR3Q13615 1198 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 DUOXA2Q1HG44 320 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 RTL10Q7L3V2 364 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 THEM5Q8N1Q8 247 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 FNBP1Q96RU3 617 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 KCNK12Q9HB15 430 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.42■■□□□ 1.66
TDP1-205ENST00000553527 CGNQ9P2M7 1197 aaKnown RBP25.42■■□□□ 1.66
TDP1-205ENST00000553527 DSEQ9UL01 958 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 INSL5Q9Y5Q6 135 aa25.42■■□□□ 1.66
TDP1-205ENST00000553527 MBD3O95983 291 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 CYP11A1P05108 521 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 PTPN2P17706 415 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 TWF1Q12792 350 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 DUSP4Q13115 394 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 PABPC1LQ4VXU2 614 aaKnown RBP25.41■■□□□ 1.66
TDP1-205ENST00000553527 ELOA2Q8IYF1 753 aaPredicted RBP25.41■■□□□ 1.66
TDP1-205ENST00000553527 ITFG1Q8TB96 612 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 RSAD2Q8WXG1 361 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 CORO1BQ9BR76 489 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 SIX4Q9UIU6 781 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 SLC27A5Q9Y2P5 690 aa25.41■■□□□ 1.66
TDP1-205ENST00000553527 TMEM221A6NGB7 291 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 M0R296 226 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 LAMP2P13473 410 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 CYP24A1Q07973 514 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 GPR17Q13304 367 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 WDR49Q8IV35 697 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 OR10T2Q8NGX3 314 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 GOLGA5Q8TBA6 731 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 GPT2Q8TD30 523 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 ING5Q8WYH8 240 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 SNX9Q9Y5X1 595 aa25.4■■□□□ 1.66
TDP1-205ENST00000553527 RHOBTB3O94955 611 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 SMC2O95347 1197 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 RHOP08100 348 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 SIGLEC14Q08ET2 396 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 MYBPC2Q14324 1141 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms