RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 YWHAHQ04917 246 aaPredicted RBP12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 BFSP1Q12934 665 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 ADAM9Q13443 819 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 TJAP1Q5JTD0 557 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 ISM2Q6H9L7 571 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 TRAPPC11Q7Z392 1133 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 GLYCTKQ8IVS8 523 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 CSGALNACT2Q8N6G5 542 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 HDAC7Q8WUI4 952 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 PLEKHA4Q9H4M7 779 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 MAN1C1Q9NR34 630 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 GDAP2Q9NXN4 497 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 FBXW11Q9UKB1 542 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 AGAP1Q9UPQ3 857 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 CTNND2Q9UQB3 1225 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 FAM50BQ9Y247 325 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 R3HCC1Q9Y3T6 440 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 CDY1Q9Y6F8 540 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 NOTCH4Q99466 2003 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 GREB1Q4ZG55 1949 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 PATJQ8NI35 1801 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 IKBKBO14920 756 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 TGM5O43548 720 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 PAPLNO95428 1278 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 STAU1O95793 577 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 KRT13P13646 458 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 VAMP7P51809 220 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 MCCD1P59942 119 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 FKBP3Q00688 224 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 ROR1Q01973 937 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 ITIH3Q06033 890 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 MYO1EQ12965 1108 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 PAK1Q13153 545 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 RAB33AQ14088 237 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 CLUL1Q15846 466 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 CTXN3Q4LDR2 81 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 OVOS1Q6IE37 1185 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 PTCRAQ6ISU1 281 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 TTI2Q6NXR4 508 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 LILRA6Q6PI73 481 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 SYCE2Q6PIF2 218 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 SPATA18Q8TC71 538 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 NELFBQ8WX92 580 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 POP1Q99575 1024 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 FBXL5Q9UKA1 691 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 CUL9Q8IWT3 2517 aa12.61□□□□□ -0.39
TRAFD1-209ENST00000552896 GRXCR2A6NFK2 248 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 OR6C75A6NL08 312 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 CYB561D2O14569 222 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 ADAM12O43184 909 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 MBTPS2O43462 519 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 OR1D2P34982 312 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 DLG4P78352 724 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 SMAD2Q15796 467 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 ZACNQ401N2 412 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 TDRD10Q5VZ19 366 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 TPGS2Q68CL5 300 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 KLHL10Q6JEL2 608 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 RSPO2Q6UXX9 243 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 RBM43Q6ZSC3 357 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 PALB2Q86YC2 1186 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 TMEM86AQ8N2M4 240 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 TOP6BLQ8N6T0 577 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 CMASQ8NFW8 434 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 SUSD6Q92537 303 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 ZNF516Q92618 1163 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 SYAP1Q96A49 352 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 HPDLQ96IR7 371 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 CEP63Q96MT8 703 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 RHOBTB2Q9BYZ6 727 aa12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 USP15Q9Y4E8 981 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 TIMM13Q9Y5L4 95 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 ZNF638Q14966 1978 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-209ENST00000552896 WDR27A2RRH5 827 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 TRIM49P0CI25 452 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 TRIM49CP0CI26 452 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 BMP1P13497 986 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 CPB1P15086 417 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 HOXA9P31269 272 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 ATICP31939 592 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 BIRC3Q13489 604 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 TRPC3Q13507 836 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 C1orf220Q5T0J3 134 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 LIN9Q5TKA1 542 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 SCARA3Q6AZY7 606 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 CES5AQ6NT32 575 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 C15orf39Q6ZRI6 1047 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 RTL10Q7L3V2 364 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 LIMS2Q7Z4I7 341 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 METTL23Q86XA0 190 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 PDCL2Q8N4E4 241 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 MLKLQ8NB16 471 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 KREMEN2Q8NCW0 462 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 ZNF461Q8TAF7 563 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 EEF2KMTQ96G04 330 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 DUSP9Q99956 384 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms