RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 ELP3Q9H9T3 547 aa11.7□□□□□ -0.54
TUBA1C-209ENST00000552448 IL1RAPL1Q9NZN1 696 aa11.7□□□□□ -0.54
TUBA1C-209ENST00000552448 TCEAL9Q9UHQ7 104 aa11.7□□□□□ -0.54
TUBA1C-209ENST00000552448 DNAJC12Q9UKB3 198 aa11.7□□□□□ -0.54
TUBA1C-209ENST00000552448 PNMA3Q9UL41 463 aa11.7□□□□□ -0.54
TUBA1C-209ENST00000552448 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.7□□□□□ -0.54
TUBA1C-209ENST00000552448 DDX3XO00571 662 aaKnown RBP eCLIP11.69□□□□□ -0.549e-67■■□□□ 14.2
TUBA1C-209ENST00000552448 SLC16A4O15374 487 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 DDX3YO15523 660 aaKnown RBP11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 ZNF862O60290 1169 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 STBD1O95210 358 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 SOX5P35711 763 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 MCCD1P59942 119 aaPredicted RBP11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 DLG4P78352 724 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 NR1H3Q13133 447 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 C1orf220Q5T0J3 134 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 LDLRAD1Q5T700 205 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 FAM102BQ5T8I3 360 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 TRIM74Q86UV6 250 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 TRIM73Q86UV7 250 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 XXYLT1Q8NBI6 393 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 FAM13CQ8NE31 585 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 SLC30A5Q8TAD4 765 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 LRRC8CQ8TDW0 803 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 CTNNBL1Q8WYA6 563 aaPredicted RBP11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 PTPRN2Q92932 1015 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 ART4Q93070 314 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 OPTNQ96CV9 577 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 OTUD5Q96G74 571 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 LRRC37BQ96QE4 947 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 IWS1Q96ST2 819 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 SYT11Q9BT88 431 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 TRIM31Q9BZY9 425 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 SAR1AQ9NR31 198 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 GRHL1Q9NZI5 618 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 HSPBP1Q9NZL4 362 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 ATXN10Q9UBB4 475 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 APEX2Q9UBZ4 518 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 NKX1-2Q9UD57 310 aaPredicted RBP11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 LNPEPQ9UIQ6 1025 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 AGTPBP1Q9UPW5 1226 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 GMEB1Q9Y692 573 aa11.69□□□□□ -0.54
TUBA1C-209ENST00000552448 PFASO15067 1338 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 NFASCO94856 1347 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 WDR81Q562E7 1941 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 KIAA1217Q5T5P2 1943 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 PDHA1P08559 390 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 KRT13P13646 458 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 MARK3P27448 753 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 PTGIRP43119 386 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 VAMP7P51809 220 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 SLC18A1P54219 525 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 HADHBP55084 474 aaKnown RBP11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 PPARDQ03181 441 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 PPP3CAQ08209 521 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 PHLDB3Q6NSJ2 640 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 GADL1Q6ZQY3 521 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 RGS9BPQ6ZS82 235 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 CEP128Q6ZU80 1094 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 TRMT1LQ7Z2T5 733 aaKnown RBP11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 ECHDC2Q86YB7 292 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 UBL4BQ8N7F7 174 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 SLC17A8Q8NDX2 589 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 TMEM161BQ8NDZ6 487 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 STKLD1Q8NE28 680 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 ZSWIM2Q8NEG5 633 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 EPS8L3Q8TE67 593 aaKnown RBP11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 NCSTNQ92542 709 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 UTP4Q969X6 686 aaKnown RBP11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 PITPNM3Q9BZ71 974 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 SEMA4AQ9H3S1 761 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 LRRC4CQ9HCJ2 640 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 GABBR1Q9UBS5 961 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 MTUS1Q9ULD2 1270 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 PHF24Q9UPV7 400 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 SNX24Q9Y343 169 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 TELO2Q9Y4R8 837 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 EMSYQ7Z589 1322 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 PASKQ96RG2 1323 aa11.68□□□□□ -0.54
TUBA1C-209ENST00000552448 SPATA31C2B4DYI2 1134 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 P4HA2O15460 535 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CTNNA2P26232 953 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 RANBP1P43487 201 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 NPTX2P47972 431 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 POLE2P56282 527 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CAV1Q03135 178 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 SFSWAPQ12872 951 aaKnown RBP11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CALCOCO2Q13137 446 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 TCEAL1Q15170 157 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 CCDC6Q16204 474 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 TREML2Q5T2D2 321 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 VSTM1Q6UX27 236 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 OTUD6AQ7L8S5 288 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 DNAAF5Q86Y56 855 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 RIOX2Q8IUF8 465 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 RIBC1Q8N443 379 aaPredicted RBP11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 DNERQ8NFT8 737 aa11.67□□□□□ -0.54
TUBA1C-209ENST00000552448 LNX1Q8TBB1 728 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms