RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 ZMYND12Q9H0C1 365 aa13.72□□□□□ -0.21
SNRPF-204ENST00000552085 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
SNRPF-204ENST00000552085 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
SNRPF-204ENST00000552085 DNAAF2Q9NVR5 837 aaKnown RBP13.72□□□□□ -0.21
SNRPF-204ENST00000552085 DKC1O60832 514 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNRPF-204ENST00000552085 SERPINF2P08697 491 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 WEE1P30291 646 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 QARSP47897 775 aaKnown RBP13.71□□□□□ -0.21
SNRPF-204ENST00000552085 PSMD2Q13200 908 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 SLC14A1Q13336 389 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 CAPSQ13938 189 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 MRPL58Q14197 206 aaKnown RBP13.71□□□□□ -0.21
SNRPF-204ENST00000552085 LYSMD4Q5XG99 296 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 SLCO6A1Q86UG4 719 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 MDGA1Q8NFP4 955 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 OLIG1Q8TAK6 271 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 EXOC4Q96A65 974 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 FNBP1Q96RU3 617 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 POLR3CQ9BUI4 534 aaPredicted RBP13.71□□□□□ -0.21
SNRPF-204ENST00000552085 EBF3Q9H4W6 596 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 CAPN10Q9HC96 672 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 KIAA1522Q9P206 1035 aaPredicted RBP13.71□□□□□ -0.21
SNRPF-204ENST00000552085 YIPF1Q9Y548 306 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
SNRPF-204ENST00000552085 ARHGAP33O14559 1287 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 U2AF2P26368 475 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNRPF-204ENST00000552085 ITPKBP27987 946 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 P2RY2P41231 377 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 USP11P51784 963 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 CTXN3Q4LDR2 81 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 ARHGAP15Q53QZ3 475 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 SPDYCQ5MJ68 293 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 NAIF1Q69YI7 327 aaPredicted RBP13.7□□□□□ -0.22
SNRPF-204ENST00000552085 SYNE3Q6ZMZ3 975 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 GAREM2Q75VX8 874 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 GLRX5Q86SX6 157 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 NAXDQ8IW45 347 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 RLN3Q8WXF3 142 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 EZH1Q92800 747 aaPredicted RBP13.7□□□□□ -0.22
SNRPF-204ENST00000552085 FCRL3Q96P31 734 aaPredicted RBP13.7□□□□□ -0.22
SNRPF-204ENST00000552085 NFKBIZQ9BYH8 718 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 ATXN3LQ9H3M9 355 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 COL6A6A6NMZ7 2263 aa13.7□□□□□ -0.22
SNRPF-204ENST00000552085 GOLGA4Q13439 2230 aaKnown RBP13.7□□□□□ -0.22
SNRPF-204ENST00000552085 PYCARD-AS1I3L0S3 204 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 SYN3O14994 580 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 IGHDP01880 384 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 NTRK1P04629 796 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 ITPKAP23677 461 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 CHMLP26374 656 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 EPHB3P54753 998 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 PLD1Q13393 1074 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 PFKFB3Q16875 520 aaPredicted RBP13.69□□□□□ -0.22
SNRPF-204ENST00000552085 LMBRD2Q68DH5 695 aaPredicted RBP13.69□□□□□ -0.22
SNRPF-204ENST00000552085 TRIM68Q6AZZ1 485 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 RNF19BQ6ZMZ0 732 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 SGMS1Q86VZ5 419 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 ASAP3Q8TDY4 903 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 SPACA7Q96KW9 195 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 PPP1R10Q96QC0 940 aaKnown RBP13.69□□□□□ -0.22
SNRPF-204ENST00000552085 DNAJC25Q9H1X3 360 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 TASP1Q9H6P5 420 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 GOLGA2P5Q9HBQ8 144 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 XPNPEP1Q9NQW7 623 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 WRAP73Q9P2S5 460 aaPredicted RBP13.69□□□□□ -0.22
SNRPF-204ENST00000552085 CIZ1Q9ULV3 898 aaPredicted RBP13.69□□□□□ -0.22
SNRPF-204ENST00000552085 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
SNRPF-204ENST00000552085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.68□□□□□ -0.22
SNRPF-204ENST00000552085 EML1O00423 815 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 GJB3O75712 270 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 FGF19O95750 216 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 SYPP08247 313 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 GNA11P29992 359 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 RTN1Q16799 776 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 Q4G0T1 1027 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 GLRA4Q5JXX5 417 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 OTUD6AQ7L8S5 288 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 KRT25Q7Z3Z0 450 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 RABEPKQ7Z6M1 372 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 TTC30AQ86WT1 665 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 FRMD1Q8N878 549 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 CCDC12Q8WUD4 166 aaPredicted RBP13.68□□□□□ -0.22
SNRPF-204ENST00000552085 LRRC2Q9BYS8 371 aa13.68□□□□□ -0.22
SNRPF-204ENST00000552085 SMG9Q9H0W8 520 aaKnown RBP13.68□□□□□ -0.22
SNRPF-204ENST00000552085 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
SNRPF-204ENST00000552085 USP9XQ93008 2570 aaPredicted RBP13.67□□□□□ -0.22
SNRPF-204ENST00000552085 TEX51A0A1B0GUA7 166 aa13.67□□□□□ -0.22
SNRPF-204ENST00000552085 N4BP3O15049 544 aa13.67□□□□□ -0.22
SNRPF-204ENST00000552085 SGSM2O43147 1006 aa13.67□□□□□ -0.22
SNRPF-204ENST00000552085 WISP1O95388 367 aa13.67□□□□□ -0.22
SNRPF-204ENST00000552085 P4HBP07237 508 aaKnown RBP13.67□□□□□ -0.22
SNRPF-204ENST00000552085 CPB1P15086 417 aa13.67□□□□□ -0.22
SNRPF-204ENST00000552085 GSPT1P15170 499 aaKnown RBP13.67□□□□□ -0.22
SNRPF-204ENST00000552085 ARSAP15289 507 aa13.67□□□□□ -0.22
SNRPF-204ENST00000552085 GABRR2P28476 465 aa13.67□□□□□ -0.22
SNRPF-204ENST00000552085 YWHABP31946 246 aaKnown RBP13.67□□□□□ -0.22
SNRPF-204ENST00000552085 GJA4P35212 333 aa13.67□□□□□ -0.22
SNRPF-204ENST00000552085 CYP4A11Q02928 519 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms