RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 PCDHB6Q9Y5E3 794 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 STK24Q9Y6E0 443 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 ACACBO00763 2458 aa23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 TTC26A0AVF1 554 aa23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 CXCL8P10145 99 aa23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 CTHP32929 405 aa23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 EPHB3P54753 998 aa23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 MCL1Q07820 350 aa23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 RAD51AP2Q09MP3 1159 aa23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 FAM160A2Q8N612 972 aaPredicted RBP23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 SPIRE2Q8WWL2 714 aa23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 PLEKHA5Q9HAU0 1116 aa23.58■■□□□ 1.37
SMARCD1-212ENST00000551966 MAPTP10636 758 aaKnown RBP23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 GUCY2CP25092 1073 aa23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 GUCY2FP51841 1108 aa23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 ST3GAL2Q16842 350 aa23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 DGKKQ5KSL6 1271 aa23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 KRT79Q5XKE5 535 aa23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 C1orf228Q6PIY5 440 aa23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 DNAJB7Q7Z6W7 309 aaPredicted RBP23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 RALGPS2Q86X27 583 aaPredicted RBP23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 TTC9BQ8N6N2 239 aa23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 ATAD1Q8NBU5 361 aa23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 TMEM209Q96SK2 561 aa23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 OXCT2Q9BYC2 517 aaPredicted RBP23.57■■□□□ 1.36
SMARCD1-212ENST00000551966 CLDN3O15551 220 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 SOAT2O75908 522 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 PLS3P13797 630 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 HOXA6P31267 233 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 TNFSF9P41273 254 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 ALDH1A3P47895 512 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 STRN3Q13033 797 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 PLD1Q13393 1074 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 CCINQ13939 588 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 PON2Q15165 354 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 ZPBP2Q6X784 338 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 KIF12Q96FN5 646 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 LLPHQ9BRT6 129 aaKnown RBP23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 ATXN3LQ9H3M9 355 aa23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 NOL7Q9UMY1 257 aaKnown RBP23.56■■□□□ 1.36
SMARCD1-212ENST00000551966 MTMR11A4FU01 709 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 OR6C75A6NL08 312 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 LACTBL1A8MY62 500 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 PPEF2O14830 753 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 CLTAP09496 248 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 CYP3A5P20815 502 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 U2AF2P26368 475 aaKnown RBP eCLIP23.55■■□□□ 1.364e-7■■□□□ 13.2
SMARCD1-212ENST00000551966 CACNB1Q02641 598 aaPredicted RBP23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 TNK2Q07912 1038 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 ARHGAP29Q52LW3 1261 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 DSTYKQ6XUX3 929 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 PSMG2Q969U7 264 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 TIPINQ9BVW5 301 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 RAB34Q9BZG1 259 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 LIMCH1Q9UPQ0 1083 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 RALGAPA1Q6GYQ0 2036 aa23.55■■□□□ 1.36
SMARCD1-212ENST00000551966 GNL2Q13823 731 aaKnown RBP23.54■■□□□ 1.36
SMARCD1-212ENST00000551966 GPR158Q5T848 1215 aa23.54■■□□□ 1.36
SMARCD1-212ENST00000551966 USP37Q86T82 979 aa23.54■■□□□ 1.36
SMARCD1-212ENST00000551966 WDR5BQ86VZ2 330 aa23.54■■□□□ 1.36
SMARCD1-212ENST00000551966 PNMA5Q96PV4 448 aa23.54■■□□□ 1.36
SMARCD1-212ENST00000551966 OBP2AQ9NY56 170 aa23.54■■□□□ 1.36
SMARCD1-212ENST00000551966 UBQLN1Q9UMX0 589 aaKnown RBP23.54■■□□□ 1.36
SMARCD1-212ENST00000551966 ASB3Q9Y575 518 aa23.54■■□□□ 1.36
SMARCD1-212ENST00000551966 DPYSL4O14531 572 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 TM4SF5O14894 197 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 EXTL3O43909 919 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 PRAMEF12O95522 483 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 GABRR2P28476 465 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 SMTNP53814 917 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 MYBPC2Q14324 1141 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 OVOS1Q6IE37 1185 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 PKN3Q6P5Z2 889 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 CEP68Q76N32 757 aa23.53■■□□□ 1.36
SMARCD1-212ENST00000551966 NPHP3-ACAD11A0A0J9YXS1 232 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 AXIN1O15169 862 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 FAM189A1O60320 539 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 ADRB2P07550 413 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 TYMPP19971 482 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 PRPHP41219 470 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 CDR1P51861 262 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 LILRA4P59901 499 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 SF3A2Q15428 464 aaKnown RBP23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 SYNPOQ8N3V7 929 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 SYT2Q8N9I0 419 aaPredicted RBP23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 CHAMP1Q96JM3 812 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 ARRDC1-AS1Q9H2J1 176 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 RXFP3Q9NSD7 469 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 KCNG1Q9UIX4 513 aa23.52■■□□□ 1.36
SMARCD1-212ENST00000551966 SEC24BO95487 1268 aa23.51■■□□□ 1.35
SMARCD1-212ENST00000551966 WEE1P30291 646 aa23.51■■□□□ 1.35
SMARCD1-212ENST00000551966 MATR3P43243 847 aaKnown RBP eCLIP23.51■■□□□ 1.35
SMARCD1-212ENST00000551966 PXNP49023 591 aaPredicted RBP23.51■■□□□ 1.35
SMARCD1-212ENST00000551966 CYP4F8P98187 520 aa23.51■■□□□ 1.35
SMARCD1-212ENST00000551966 ZRSR1Q15695 479 aaKnown RBP23.51■■□□□ 1.35
SMARCD1-212ENST00000551966 CCDC6Q16204 474 aa23.51■■□□□ 1.35
SMARCD1-212ENST00000551966 ENOX2Q16206 610 aaKnown RBP23.51■■□□□ 1.35
SMARCD1-212ENST00000551966 HYIQ5T013 277 aa23.51■■□□□ 1.35
SMARCD1-212ENST00000551966 DTHD1Q6ZMT9 781 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms