RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 PRKD2Q9BZL6 878 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 CDH22Q9UJ99 828 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 MAFFQ9ULX9 164 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 TIMM13Q9Y5L4 95 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 PTPRJQ12913 1337 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 CCDC195A0A1B0GUA6 201 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 WDR27A2RRH5 827 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 KPNA7A9QM74 516 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 ABLIM3O94929 683 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 WEE2P0C1S8 567 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 DLATP10515 647 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 PPM1LQ5SGD2 360 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 ZNF658Q5TYW1 1059 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 LMBRD2Q68DH5 695 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 RNF135Q8IUD6 432 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 CSGALNACT2Q8N6G5 542 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 RDH13Q8NBN7 331 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 OR5B17Q8NGF7 314 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 SMG7Q92540 1137 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 BORCS6Q96GS4 357 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 SIX4Q9UIU6 781 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 AGAP1Q9UPQ3 857 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 USTQ9Y2C2 406 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 NR2E1Q9Y466 385 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 PCDHA5Q9Y5H7 936 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 ANK1P16157 1881 aa16.62■□□□□ 0.25
PRPF40B-211ENST00000551063 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 CYB561D2O14569 222 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 MAPK13O15264 365 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 CPB1P15086 417 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 ATF2P15336 505 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 TNNI1P19237 187 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 ZCWPW2Q504Y3 356 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 METTL23Q86XA0 190 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 SLC7A14Q8TBB6 771 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 SPATA18Q8TC71 538 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 CCDC127Q96BQ5 260 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 FAM84AQ96KN4 292 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 RPGRIP1Q96KN7 1286 aa16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 WDR6Q9NNW5 1121 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 AFF4Q9UHB7 1163 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-211ENST00000551063 XYLBO75191 536 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 KRT19P08727 400 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 NR2F2P24468 414 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 RPL13P26373 211 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 ELF1P32519 619 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 AP3M2P53677 418 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 ARPP19P56211 112 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 BFSP1Q12934 665 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 MYO1EQ12965 1108 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 EDRF1Q3B7T1 1238 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 CLEC17AQ6ZS10 378 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 TCEAL8Q8IYN2 117 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 TDRD5Q8NAT2 981 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 FEZF2Q8TBJ5 459 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 PIDD1Q9HB75 910 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 GDAP2Q9NXN4 497 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 MUTYHQ9UIF7 546 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 MAPK8IP1Q9UQF2 711 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 FRMD4BQ9Y2L6 1034 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 CLUHO75153 1309 aa16.6■□□□□ 0.25
PRPF40B-211ENST00000551063 PLXNA3P51805 1871 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 CLDN10P78369 228 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 ENPEPQ07075 957 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 GPR17Q13304 367 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 SMYD4Q8IYR2 804 aaPredicted RBP16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 THEM5Q8N1Q8 247 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 TMEM86AQ8N2M4 240 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 TOP6BLQ8N6T0 577 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 PLEKHO2Q8TD55 490 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 PARD3BQ8TEW8 1205 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 KCNH6Q9H252 994 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 CYP4F11Q9HBI6 524 aa16.59■□□□□ 0.25
PRPF40B-211ENST00000551063 LRRIQ3A6PVS8 624 aaPredicted RBP16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 C2CD4DB7Z1M9 353 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 PRRG1O14668 218 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 HUS1O60921 280 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 STAU1O95793 577 aaKnown RBP16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 PPP1R2P41236 205 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 CASP4P49662 377 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 WSCD1Q658N2 575 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 OTOP3Q7RTS5 596 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 OR10T2Q8NGX3 314 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 TMC2Q8TDI7 906 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 EDAQ92838 391 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 ERCC4Q92889 916 aaPredicted RBP16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 ACSF2Q96CM8 615 aaPredicted RBP16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 HPDLQ96IR7 371 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 IPO9Q96P70 1041 aaKnown RBP16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 TSHZ2Q9NRE2 1034 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 L1RE1Q9UN81 338 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 INSL5Q9Y5Q6 135 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 SNX9Q9Y5X1 595 aa16.58■□□□□ 0.24
PRPF40B-211ENST00000551063 CCL16O15467 120 aa16.57■□□□□ 0.24
PRPF40B-211ENST00000551063 AKAP3O75969 853 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms