RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PARP1P09874 1014 aaKnown RBP6.35□□□□□ -1.39
CPSF6-206ENST00000550987 FTH1P19P0C7X4 201 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 SREBF1P36956 1147 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 TECP42680 631 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 KCNJ5P48544 419 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 CREMQ03060 361 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 TNFAIP2Q03169 654 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 DUSP2Q05923 314 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 ADAM15Q13444 863 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 RTP5Q14D33 572 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 ELF2Q15723 593 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 SYTL1Q8IYJ3 562 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 MSL3Q8N5Y2 521 aaKnown RBP6.35□□□□□ -1.39
CPSF6-206ENST00000550987 SPATA5Q8NB90 893 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 IFI44Q8TCB0 444 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 KIAA1191Q96A73 305 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 LIN37Q96GY3 246 aaPredicted RBP6.35□□□□□ -1.39
CPSF6-206ENST00000550987 NOX5Q96PH1 765 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 EPB41L4BQ9H329 900 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 SACM1LQ9NTJ5 587 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 ING3Q9NXR8 418 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 GPRC5DQ9NZD1 345 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 GPRC5BQ9NZH0 403 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 LUZP4Q9P127 313 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.35□□□□□ -1.39
CPSF6-206ENST00000550987 CPNE7Q9UBL6 633 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 ZFYVE9O95405 1425 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 SPATA31A3Q5VYP0 1347 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 HYAL3O43820 417 aaPredicted RBP6.34□□□□□ -1.39
CPSF6-206ENST00000550987 PPFIA4O75335 1185 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 ITGA10O75578 1167 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 IL2RBP14784 551 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 CRHR1P34998 444 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 CHKAP35790 457 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 KIR2DL3P43628 341 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 LIMS1P48059 325 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 MLLT6P55198 1093 aaPredicted RBP6.34□□□□□ -1.39
CPSF6-206ENST00000550987 WNT3AP56704 352 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 TLE1Q04724 770 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 ACAP1Q15027 740 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 PGBD2Q6P3X8 592 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 PDZD4Q76G19 769 aaPredicted RBP6.34□□□□□ -1.39
CPSF6-206ENST00000550987 FBXO18Q8NFZ0 1043 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 TNPO1Q92973 898 aaKnown RBP6.34□□□□□ -1.39
CPSF6-206ENST00000550987 CDC5LQ99459 802 aaKnown RBP6.34□□□□□ -1.39
CPSF6-206ENST00000550987 SGPP1Q9BX95 441 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 SLAMF7Q9NQ25 335 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 MBD1Q9UIS9 605 aaPredicted RBP6.34□□□□□ -1.39
CPSF6-206ENST00000550987 PCDHGB2Q9Y5G2 931 aa6.34□□□□□ -1.39
CPSF6-206ENST00000550987 ATP7BP35670 1465 aa6.34□□□□□ -1.4
CPSF6-206ENST00000550987 EIF2AK4Q9P2K8 1649 aaKnown RBP6.33□□□□□ -1.4
CPSF6-206ENST00000550987 TEX51A0A1B0GUA7 166 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 SCO2A0A1W2PP80 73 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 APOL1O14791 398 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 TBC1D4O60343 1298 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 AMY1AP04745 511 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 GYPEP15421 78 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 TYRP1P17643 537 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 ITGB7P26010 798 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 ETV4P43268 484 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 CTXN1P60606 82 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 POU5F1BQ06416 359 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 LRP8Q14114 963 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 DAG1Q14118 895 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 STARD3Q14849 445 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 PCOLCEQ15113 449 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 PRR16Q569H4 304 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 ZMYM1Q5SVZ6 1142 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 CLEC14AQ86T13 490 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 ZGPATQ8N5A5 531 aaKnown RBP6.33□□□□□ -1.4
CPSF6-206ENST00000550987 LINC00482Q8N8I6 264 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 REPS2Q8NFH8 660 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 BRI3BPQ8WY22 251 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 FAM168AQ92567 244 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 ARL8AQ96BM9 186 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 LTV1Q96GA3 475 aaPredicted RBP6.33□□□□□ -1.4
CPSF6-206ENST00000550987 PRDM16Q9HAZ2 1276 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 MOCS1Q9NZB8 636 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 NCDNQ9UBB6 729 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 TRPS1Q9UHF7 1281 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 RUVBL1Q9Y265 456 aaKnown RBP6.33□□□□□ -1.4
CPSF6-206ENST00000550987 PMF1-BGLAPU3KQ54 211 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 SSH2Q76I76 1423 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 MUC6Q6W4X9 2439 aa6.33□□□□□ -1.4
CPSF6-206ENST00000550987 H0YGN5 161 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 MYO1FO00160 1098 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 ADAMTS3O15072 1205 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 TEX33O43247 280 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 CYP1A1P04798 512 aaPredicted RBP6.32□□□□□ -1.4
CPSF6-206ENST00000550987 NPR1P16066 1061 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 RRADP55042 308 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 TOP3AQ13472 1001 aaPredicted RBP6.32□□□□□ -1.4
CPSF6-206ENST00000550987 ARL13BQ3SXY8 428 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 CCDC38Q502W7 563 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 TRIM68Q6AZZ1 485 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 HIBCHQ6NVY1 386 aaPredicted RBP6.32□□□□□ -1.4
CPSF6-206ENST00000550987 SAPCD2Q86UD0 394 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 PPP1R3BQ86XI6 285 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 IGDCC3Q8IVU1 814 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms