RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ROM1Q03395 351 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 MAP3K12Q12852 859 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 FKBP1CQ5VVH2 108 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 FAM83AQ86UY5 434 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 LRRTM3Q86VH5 581 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 FUKQ8N0W3 1084 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 OR14K1Q8NGZ2 314 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 NINJ1Q92982 152 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 MAML3Q96JK9 1138 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 CDK5RAP1Q96SZ6 601 aaKnown RBP5.94□□□□□ -1.46
SCAF11-214ENST00000550893 ELF4Q99607 663 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-214ENST00000550893 IDI2Q9BXS1 227 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 VEZTQ9HBM0 779 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 GPR108Q9NPR9 543 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 OXSMQ9NWU1 459 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 SAGE1Q9NXZ1 904 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 MAGEL2Q9UJ55 1249 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 FAM184BQ9ULE4 1060 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 EXOC6BQ9Y2D4 811 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 CEP290O15078 2479 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 LRRC37A2A6NM11 1700 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 MYH4Q9Y623 1939 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 ZNF236Q9UL36 1845 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 GPR75-ASB3A0A0A6YYF3 556 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 MATN3O15232 486 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 CDC45O75419 566 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 TNFRSF1AP19438 455 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 POU3F2P20265 443 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-214ENST00000550893 ANTXR2P58335 489 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 MAP2K1Q02750 393 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-214ENST00000550893 HGFACQ04756 655 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 DUSP8Q13202 625 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 TTC38Q5R3I4 469 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 SLFN12LQ6IEE8 588 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 ESRP1Q6NXG1 681 aaKnown RBP5.93□□□□□ -1.46
SCAF11-214ENST00000550893 CNNM4Q6P4Q7 775 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 SPRED1Q7Z699 444 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 ITPRIPQ8IWB1 547 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 DHX37Q8IY37 1157 aaKnown RBP5.93□□□□□ -1.46
SCAF11-214ENST00000550893 FAM43AQ8N2R8 423 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 NXPE1Q8N323 547 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 WDR66Q8TBY9 1149 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 SH3RF3Q8TEJ3 882 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-214ENST00000550893 TBC1D22AQ8WUA7 517 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 ZKSCAN4Q969J2 545 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-214ENST00000550893 TEKT1Q969V4 418 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 EDC3Q96F86 508 aaKnown RBP5.93□□□□□ -1.46
SCAF11-214ENST00000550893 ABHD8Q96I13 439 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 TUBGCP5Q96RT8 1024 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 H2AFY2Q9P0M6 372 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-214ENST00000550893 PUF60Q9UHX1 559 aaKnown RBP5.93□□□□□ -1.46
SCAF11-214ENST00000550893 RCAN3Q9UKA8 241 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 HDAC9Q9UKV0 1011 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 ZKSCAN5Q9Y2L8 839 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 SPO11Q9Y5K1 396 aa5.93□□□□□ -1.46
SCAF11-214ENST00000550893 SMCHD1A6NHR9 2005 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 MUSKO15146 869 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 IPO8O15397 1037 aaKnown RBP5.92□□□□□ -1.46
SCAF11-214ENST00000550893 F2P00734 622 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 BTDP43251 543 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 ADAM15Q13444 863 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 EPHA7Q15375 998 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 CAVIN4Q5BKX8 364 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 KIF18BQ86Y91 864 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 SPATA5Q8NB90 893 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 OTUD7AQ8TE49 926 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-214ENST00000550893 FAM151AQ8WW52 585 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 OR14A2Q96R54 314 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 RIOK1Q9BRS2 568 aaKnown RBP5.92□□□□□ -1.46
SCAF11-214ENST00000550893 CCDC8Q9H0W5 538 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-214ENST00000550893 SAE1Q9UBE0 346 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-214ENST00000550893 DENND2AQ9ULE3 1009 aa5.92□□□□□ -1.46
SCAF11-214ENST00000550893 ZNF891A8MT65 544 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-214ENST00000550893 DYNLL1P63167 89 aaKnown RBP5.91□□□□□ -1.46
SCAF11-214ENST00000550893 DSG1Q02413 1049 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 TCP10Q12799 353 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 CRHR2Q13324 411 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 MYBPC3Q14896 1274 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 PCBP1Q15365 356 aaKnown RBP eCLIP5.91□□□□□ -1.46
SCAF11-214ENST00000550893 HS1BP3Q53T59 392 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 PRAMEF9Q5VWM5 478 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 GPR135Q8IZ08 494 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 OPTNQ96CV9 577 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 FEZ1Q99689 392 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 ARHGAP39Q9C0H5 1083 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 SEMA4AQ9H3S1 761 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 IL1RAPL2Q9NP60 686 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 TOMM22Q9NS69 142 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 VWA7Q9Y334 891 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 TESMINQ9Y4I5 508 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 CTDP1Q9Y5B0 961 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-214ENST00000550893 SLC30A1Q9Y6M5 507 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 PLXNA1Q9UIW2 1896 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 MAST3O60307 1309 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 FLT1P17948 1338 aa5.91□□□□□ -1.46
SCAF11-214ENST00000550893 ZNFX1Q9P2E3 1918 aaKnown RBP5.9□□□□□ -1.46
SCAF11-214ENST00000550893 BTBD19C9JJ37 291 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 CA12O43570 354 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 GAS7O60861 476 aa5.9□□□□□ -1.46
SCAF11-214ENST00000550893 ENTPD3O75355 529 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms