RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 FOXP3Q9BZS1 431 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 TMEM8AQ9HCN3 771 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 LIMA1Q9UHB6 759 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 SNX9Q9Y5X1 595 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 AKAP10O43572 662 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 EXTL3O43909 919 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 ASMTLO95671 621 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 PLA2G4AP47712 749 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 ZFP42Q96MM3 310 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 NDEL1Q9GZM8 345 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 ERAP1Q9NZ08 941 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 MYO1GB0I1T2 1018 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 NCALDP61601 193 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 PTK7Q13308 1070 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 DCAF6Q58WW2 860 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 LRIG3Q6UXM1 1119 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 PCMTD2Q9NV79 361 aa13.08□□□□□ -0.32
RAB3IP-212ENST00000550536 SNAP23O00161 211 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 STAMBPL1Q96FJ0 436 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 SEC24DO94855 1032 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 WDR47O94967 919 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 GH1P01241 217 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 ALDH1A3P47895 512 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 LRRC74AQ0VAA2 488 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 ADCK2Q7Z695 626 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 RFWD2Q8NHY2 731 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 RSAD1Q9HA92 442 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 ZNRF3Q9ULT6 936 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 DOLKQ9UPQ8 538 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 MTSS1O43312 755 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 PDGFRBP09619 1106 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 UCHL3P15374 230 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 PDGFRAP16234 1089 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 SKOR1P84550 965 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 MDH1BQ5I0G3 518 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 ADCK1Q86TW2 530 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 EME1Q96AY2 570 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 TMEM117Q9H0C3 514 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 GUCY1A2P33402 732 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 ELP3Q9H9T3 547 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 MROH2AA6NES4 1674 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 KDM1AO60341 852 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 BLVRAP53004 296 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 PRKCEQ02156 737 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 ATF7IP2Q5U623 682 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 GIMAP4Q9NUV9 329 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 C16orf96A6NNT2 1141 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 CCDC159P0C7I6 412 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 RARBP10826 455 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 CHN1P15882 459 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 CARSP49589 748 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 C16orf86Q6ZW13 317 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 ZNF677Q86XU0 584 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 ISCA1Q9BUE6 129 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 MTIF3Q9H2K0 278 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 COPG1Q9Y678 874 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 H2AFYO75367 372 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 SLC9A1P19634 815 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 HS6ST3Q8IZP7 471 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 RIBC1Q8N443 379 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 CYFIP2Q96F07 1278 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 PRR23D1E9PI22 279 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 TBX3O15119 743 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 PRR23D2P0DMB1 279 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 STX3Q13277 289 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 PTK6Q13882 451 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 EDRF1Q3B7T1 1238 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 TRIM60Q495X7 471 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 C3orf62Q6ZUJ4 267 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 PAK5Q9P286 719 aa13.07□□□□□ -0.32
RAB3IP-212ENST00000550536 POLRMTO00411 1230 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 KHDRBS2Q5VWX1 349 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 SCFD2Q8WU76 684 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 TFB1MQ8WVM0 346 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 BTN2A2Q8WVV5 523 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 USP15Q9Y4E8 981 aaPredicted RBP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 MICALL2Q8IY33 904 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 LBHD1Q9BQE6 289 aaPredicted RBP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 GRAP2O75791 330 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 KLHL2O95198 593 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 C6orf222P0C671 652 aaPredicted RBP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 TRPC1P48995 793 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 LONRF1Q17RB8 773 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 CCDC144BQ3MJ40 725 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 DAB2IPQ5VWQ8 1189 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 SDE2Q6IQ49 451 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 PLEKHA8Q96JA3 519 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 SYNDIG1Q9H7V2 258 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 PTRHD1Q6GMV3 140 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 USP27XA6NNY8 438 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 CFAP99D6REC4 459 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 SRGNP10124 158 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 RGS7P49802 495 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 PRKCQQ04759 706 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms