RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TRAK2O60296 914 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 LILRB5O75023 590 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 TBCAO75347 108 aaKnown RBP25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 PIGRP01833 764 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 GJA1P17302 382 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 TNFSF9P41273 254 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 VIPR2P41587 438 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 MCM2P49736 904 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 ARHGAP15Q53QZ3 475 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 ARSHQ5FYA8 562 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 SPATA1Q5VX52 437 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 POTEHQ6S545 545 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 NELL1Q92832 810 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 REEP2Q9BRK0 252 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 EPC1Q9H2F5 836 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 HSFX1Q9UBD0 423 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 GMEB2Q9UKD1 530 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 SMC3Q9UQE7 1217 aa25.04■■□□□ 1.6
SMARCD1-209ENST00000550477 A0A1W2PRU2 124 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 CHADO15335 359 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 MOSPD3O75425 235 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 TUFMP49411 452 aaKnown RBP25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 FZD5Q13467 585 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 TSSK4Q6SA08 328 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 METTL23Q86XA0 190 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 FAM200AQ8TCP9 573 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 TMX3Q96JJ7 454 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 C8orf33Q9H7E9 229 aaPredicted RBP25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 DSEQ9UL01 958 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 SMG5Q9UPR3 1016 aaKnown RBP25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 DERAQ9Y315 318 aa25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.03■■□□□ 1.6
SMARCD1-209ENST00000550477 PRR5-ARHGAP8B1AHC4 643 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 OR4Q2P0C623 313 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 LONP1P36776 959 aaKnown RBP25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 KPNA1P52294 538 aaPredicted RBP25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 LILRA4P59901 499 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 ARHGAP8P85298 464 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 LRRC32Q14392 662 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 VEPH1Q14D04 833 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 ENOX2Q16206 610 aaKnown RBP25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 SLFN12LQ6IEE8 588 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 CENPPQ6IPU0 288 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 SHKBP1Q8TBC3 707 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 SENP8Q96LD8 212 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 HAPLN2Q9GZV7 340 aa25.02■■□□□ 1.6
SMARCD1-209ENST00000550477 COL4A3Q01955 1670 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 A0A0B4J269 797 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 ADRB2P07550 413 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 CCNE1P24864 410 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 CXCL12P48061 93 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 TAF12Q16514 161 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 LARP1BQ659C4 914 aaKnown RBP25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 THEM5Q8N1Q8 247 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 CELF5Q8N6W0 485 aaKnown RBP25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 GCNAQ96QF7 691 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 ATXN3LQ9H3M9 355 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 ASB7Q9H672 318 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 DLL3Q9NYJ7 618 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 SLC27A5Q9Y2P5 690 aa25.01■■□□□ 1.59
SMARCD1-209ENST00000550477 MTMR11A4FU01 709 aa25■■□□□ 1.59
SMARCD1-209ENST00000550477 ZNF131P52739 623 aa25■■□□□ 1.59
SMARCD1-209ENST00000550477 SMARCB1Q12824 385 aa25■■□□□ 1.59
SMARCD1-209ENST00000550477 TMEM132DQ14C87 1099 aa25■■□□□ 1.59
SMARCD1-209ENST00000550477 RSPO4Q2I0M5 234 aaPredicted RBP25■■□□□ 1.59
SMARCD1-209ENST00000550477 C8orf34Q49A92 452 aa25■■□□□ 1.59
SMARCD1-209ENST00000550477 JADE1Q6IE81 842 aa25■■□□□ 1.59
SMARCD1-209ENST00000550477 DNAJB7Q7Z6W7 309 aaPredicted RBP25■■□□□ 1.59
SMARCD1-209ENST00000550477 KRI1Q8N9T8 703 aaKnown RBP25■■□□□ 1.59
SMARCD1-209ENST00000550477 PSMG2Q969U7 264 aa25■■□□□ 1.59
SMARCD1-209ENST00000550477 CPSF3Q9UKF6 684 aaKnown RBP25■■□□□ 1.59
SMARCD1-209ENST00000550477 ZNF292O60281 2723 aa25■■□□□ 1.59
SMARCD1-209ENST00000550477 GTF2BQ00403 316 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 LMNB2Q03252 620 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 ARHGAP29Q52LW3 1261 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 C9orf57Q5W0N0 161 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 ADALQ6DHV7 355 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 BRAPQ7Z569 592 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 ARID3BQ8IVW6 561 aaPredicted RBP24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 ATAD1Q8NBU5 361 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 RAD54LQ92698 747 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 LRRC3Q9BY71 257 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 OBP2AQ9NY56 170 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 USP18Q9UMW8 372 aa24.99■■□□□ 1.59
SMARCD1-209ENST00000550477 TICRRQ7Z2Z1 1910 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 SHISA7A6NL88 538 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 GUCY2FP51841 1108 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 POU5F1Q01860 360 aaKnown RBP24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 FCHO2Q0JRZ9 810 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 MCM6Q14566 821 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 PTPAQ15257 358 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 DGKKQ5KSL6 1271 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 TMC8Q8IU68 726 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 ZNF687Q8N1G0 1237 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 C2orf15Q8WU43 125 aaKnown RBP24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 DNAJC25Q9H1X3 360 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 THG1LQ9NWX6 298 aaKnown RBP24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 ZMYM5Q9UJ78 669 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 C2CD2Q9Y426 696 aa24.98■■□□□ 1.59
SMARCD1-209ENST00000550477 PIRO00625 290 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms