RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 MAMLD1Q13495 774 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 SMC1AQ14683 1233 aaKnown RBP20.37■□□□□ 0.85
BRF1-215ENST00000549655 PCBP1Q15365 356 aaKnown RBP eCLIP20.37■□□□□ 0.85
BRF1-215ENST00000549655 NOTUMQ6P988 496 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 NT5DC4Q86YG4 428 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 CD302Q8IX05 232 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 HPDLQ96IR7 371 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 EIF2AQ9BY44 585 aaKnown RBP20.37■□□□□ 0.85
BRF1-215ENST00000549655 UBXN6Q9BZV1 441 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 ARHGAP39Q9C0H5 1083 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 SDCBP2Q9H190 292 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 SMYD3Q9H7B4 428 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 VRTNQ9H8Y1 702 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 DPP3Q9NY33 737 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 ITGA11Q9UKX5 1188 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 AGAP1Q9UPQ3 857 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 NR2E1Q9Y466 385 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 ESYT3A0FGR9 886 aa20.36■□□□□ 0.85
BRF1-215ENST00000549655 C17orf102A2RUQ5 167 aa20.36■□□□□ 0.85
BRF1-215ENST00000549655 MMP8P22894 467 aa20.36■□□□□ 0.85
BRF1-215ENST00000549655 LACTBP83111 547 aaPredicted RBP20.36■□□□□ 0.85
BRF1-215ENST00000549655 PLEKHA7Q6IQ23 1121 aa20.36■□□□□ 0.85
BRF1-215ENST00000549655 ADAT2Q7Z6V5 191 aaKnown RBP20.36■□□□□ 0.85
BRF1-215ENST00000549655 TMEM35BQ8NCS4 154 aa20.36■□□□□ 0.85
BRF1-215ENST00000549655 MRPL47Q9HD33 250 aaKnown RBP20.36■□□□□ 0.85
BRF1-215ENST00000549655 SNTG2Q9NY99 539 aa20.36■□□□□ 0.85
BRF1-215ENST00000549655 PCDHGC3Q9UN70 934 aa20.36■□□□□ 0.85
BRF1-215ENST00000549655 DUSP11O75319 330 aaKnown RBP20.35■□□□□ 0.85
BRF1-215ENST00000549655 PYGMP11217 842 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 PSMC4P43686 418 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 FCGRTP55899 365 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 RBP5P82980 135 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 C7orf31Q8N865 590 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 C1orf131Q8NDD1 294 aaKnown RBP20.35■□□□□ 0.85
BRF1-215ENST00000549655 TMEM40Q8WWA1 233 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 SLITRK6Q9H5Y7 841 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 PLEKHA5Q9HAU0 1116 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 ST7Q9NRC1 585 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 SCINQ9Y6U3 715 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 GOLGA6L10A0A0M3HER8 536 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 MYADML2A6NDP7 307 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 C6orf222P0C671 652 aaPredicted RBP20.35■□□□□ 0.85
BRF1-215ENST00000549655 P4HA1P13674 534 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 SLC1A1P43005 524 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 CARSP49589 748 aaKnown RBP20.35■□□□□ 0.85
BRF1-215ENST00000549655 EPHB4P54760 987 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 SNX17Q15036 470 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 SEL1L2Q5TEA6 688 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 PAXIP1Q6ZW49 1069 aaPredicted RBP20.35■□□□□ 0.85
BRF1-215ENST00000549655 IFT81Q8WYA0 676 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 ZNF518BQ9C0D4 1074 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 AMACRQ9UHK6 382 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 TRIP11Q15643 1979 aa20.35■□□□□ 0.85
BRF1-215ENST00000549655 PAEPP09466 180 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 GNAT1P11488 350 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 CD19P15391 556 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 RAD23BP54727 409 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 RWDD2BP57060 319 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 CASKIN2Q8WXE0 1202 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 CXCL16Q9H2A7 254 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 VIPAS39Q9H9C1 493 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 CYP3A43Q9HB55 503 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 PARVAQ9NVD7 372 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 GABRQQ9UN88 632 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 HES2Q9Y543 173 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 CEP83Q9Y592 693 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 CALB1P05937 261 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 HOXC8P31273 242 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 CDH5P33151 784 aaPredicted RBP20.34■□□□□ 0.85
BRF1-215ENST00000549655 MFSD14CQ5VZR4 134 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 SND1Q7KZF4 910 aaKnown RBP eCLIP20.34■□□□□ 0.85
BRF1-215ENST00000549655 WDTC1Q8N5D0 677 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 CCDC26Q8TAB7 109 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 WHAMMQ8TF30 809 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 TRIB2Q92519 343 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 SNX27Q96L92 541 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 ERVK-5Q9HDB9 667 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 NFU1Q9UMS0 254 aa20.34■□□□□ 0.85
BRF1-215ENST00000549655 MED7O43513 233 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 CILPO75339 1184 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 PROSCO94903 275 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 CYBAP13498 195 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 AXLP30530 894 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 YARSP54577 528 aaKnown RBP20.33■□□□□ 0.84
BRF1-215ENST00000549655 PAK2Q13177 524 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 ORC1Q13415 861 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 TRADDQ15628 312 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 PPP2R5EQ16537 467 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 GNASQ5JWF2 1037 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 EMBQ6PCB8 327 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 MAATS1Q7Z4T9 603 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 TWNKQ96RR1 684 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 TRIM6Q9C030 488 aaPredicted RBP20.33■□□□□ 0.84
BRF1-215ENST00000549655 HMGXB4Q9UGU5 601 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 HPCAL4Q9UM19 191 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 DERAQ9Y315 318 aa20.33■□□□□ 0.84
BRF1-215ENST00000549655 TMEM88BA6NKF7 163 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 TLR3O15455 904 aaKnown RBP20.32■□□□□ 0.84
BRF1-215ENST00000549655 GJB6O95452 261 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 HSPA6P17066 643 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms