RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CUL4AQ13619 759 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 PDIA5Q14554 519 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 IL17AQ16552 155 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 ECM1Q16610 540 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 PLK5Q496M5 336 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 EEF1DP3Q658K8 133 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 MCTP1Q6DN14 999 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 KIFAP3Q92845 792 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 PPP1R10Q96QC0 940 aaKnown RBP13.34□□□□□ -0.27
DDX54-206ENST00000549271 DUSP15Q9H1R2 295 aaPredicted RBP13.34□□□□□ -0.27
DDX54-206ENST00000549271 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.34□□□□□ -0.27
DDX54-206ENST00000549271 SMC3Q9UQE7 1217 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 NEUROG3Q9Y4Z2 214 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 INSL5Q9Y5Q6 135 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
DDX54-206ENST00000549271 LNP1A1A4G5 178 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 B3GAT3O94766 335 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 GJA1P17302 382 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 PON2Q15165 354 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 NT5DC1Q5TFE4 455 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 APBB1IPQ7Z5R6 666 aaPredicted RBP13.33□□□□□ -0.28
DDX54-206ENST00000549271 YAF2Q8IY57 180 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 IGSF22Q8N9C0 903 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 LEMD2Q8NC56 503 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 IFT74Q96LB3 600 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 UROC1Q96N76 676 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 GPR88Q9GZN0 384 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 CYP4F11Q9HBI6 524 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 CEP72Q9P209 647 aa13.33□□□□□ -0.28
DDX54-206ENST00000549271 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
DDX54-206ENST00000549271 H3BQV1 296 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 I3L4J1 428 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 CAPNS1P04632 268 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 CLCNKBP51801 687 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 TEAD2Q15562 447 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 UPP1Q16831 310 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 TMEM132AQ24JP5 1023 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 XKR4Q5GH76 650 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 ATF7IP2Q5U623 682 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 LARP1BQ659C4 914 aaKnown RBP13.32□□□□□ -0.28
DDX54-206ENST00000549271 C3orf58Q8NDZ4 430 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 SHKBP1Q8TBC3 707 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 BHMT2Q9H2M3 363 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 GTSE1Q9NYZ3 720 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 LRWD1Q9UFC0 647 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 TNFSF13BQ9Y275 285 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 USP20Q9Y2K6 914 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 MSRB2Q9Y3D2 182 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 BPTFQ12830 3046 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
DDX54-206ENST00000549271 ABCA7Q8IZY2 2146 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 BCLAF3A2AJT9 711 aaKnown RBP13.31□□□□□ -0.28
DDX54-206ENST00000549271 K7ERI5 159 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 LAD1O00515 517 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 CDX4O14627 284 aaPredicted RBP13.31□□□□□ -0.28
DDX54-206ENST00000549271 TRAPPC3O43617 180 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 CAVIN2O95810 425 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 MYL4P12829 197 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 CCT6AP40227 531 aaKnown RBP13.31□□□□□ -0.28
DDX54-206ENST00000549271 PRPHP41219 470 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 RILPL1Q5EBL4 403 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 TPGS2Q68CL5 300 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 IQCEQ6IPM2 695 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 ALKAL1Q6UXT8 129 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 ELMOD1Q8N336 334 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 FAM200AQ8TCP9 573 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 ZNF512Q96ME7 567 aaPredicted RBP13.31□□□□□ -0.28
DDX54-206ENST00000549271 LRRC3BQ96PB8 259 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 KIFC3Q9BVG8 833 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 TMEM134Q9H6X4 195 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 PTPRHQ9HD43 1115 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 TMEM9BQ9NQ34 198 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 ASAH2Q9NR71 780 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 GDAQ9Y2T3 454 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 GTF3C3Q9Y5Q9 886 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 MAST4O15021 2626 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 THADAQ6YHU6 1953 aa13.31□□□□□ -0.28
DDX54-206ENST00000549271 SMIM28A0A1B0GU29 152 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 PP2D1A8MPX8 630 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 HYAL3O43820 417 aaPredicted RBP13.3□□□□□ -0.28
DDX54-206ENST00000549271 ZIC2O95409 532 aaPredicted RBP13.3□□□□□ -0.28
DDX54-206ENST00000549271 CDC25AP30304 524 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 GRM5P41594 1212 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 BRCC3P46736 316 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 ATP2C1P98194 919 aaPredicted RBP13.3□□□□□ -0.28
DDX54-206ENST00000549271 CREB5Q02930 508 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 TWF1Q12792 350 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 MRPL58Q14197 206 aaKnown RBP13.3□□□□□ -0.28
DDX54-206ENST00000549271 ELF2Q15723 593 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 ARHGAP29Q52LW3 1261 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 CAMKK1Q8N5S9 505 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 TTC8Q8TAM2 541 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 ZFYVE19Q96K21 471 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 ACO2Q99798 780 aaKnown RBP13.3□□□□□ -0.28
DDX54-206ENST00000549271 MMTAG2Q9BU76 263 aaKnown RBP13.3□□□□□ -0.28
DDX54-206ENST00000549271 LRRC3Q9BY71 257 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 RAB34Q9BZG1 259 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 SLITRK6Q9H5Y7 841 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms