RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 OGTO15294 1046 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 FAM189A1O60320 539 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 VNN2O95498 520 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 FGF19O95750 216 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 VIPR2P41587 438 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 ALDH1A3P47895 512 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 LIG4P49917 911 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 CCR3P51677 355 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 ZNF131P52739 623 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 EPHB3P54753 998 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 TMC8Q8IU68 726 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 SLITRK6Q9H5Y7 841 aa13.97□□□□□ -0.17
PTCH1-218ENST00000548945 NDRG2Q9UN36 371 aaKnown RBP13.97□□□□□ -0.17
PTCH1-218ENST00000548945 CNOT1A5YKK6 2376 aaKnown RBP13.97□□□□□ -0.17
PTCH1-218ENST00000548945 CHD8Q9HCK8 2581 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 A0A0B4J269 797 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 MED19A0JLT2 244 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-218ENST00000548945 HEPACAM2A8MVW5 462 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 LACTBL1A8MY62 500 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 PRR5-ARHGAP8B1AHC4 643 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 CHADO15335 359 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 ODC1P11926 461 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 TNFSF9P41273 254 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 LILRA4P59901 499 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 ARHGAP8P85298 464 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 LMNB2Q03252 620 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 SPAG1Q07617 926 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 FCHO2Q0JRZ9 810 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 DUSP4Q13115 394 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 RABEP1Q15276 862 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 TEAD2Q15562 447 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 ENOX2Q16206 610 aaKnown RBP13.96□□□□□ -0.17
PTCH1-218ENST00000548945 RSPO4Q2I0M5 234 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-218ENST00000548945 SPATA1Q5VX52 437 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 OVOS1Q6IE37 1185 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 CENPPQ6IPU0 288 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 DSTYKQ6XUX3 929 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 PLIN2Q99541 437 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 REEP2Q9BRK0 252 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 DNAJC25Q9H1X3 360 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 C8orf33Q9H7E9 229 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-218ENST00000548945 RPF1Q9H9Y2 349 aaKnown RBP13.96□□□□□ -0.17
PTCH1-218ENST00000548945 LMAN1LQ9HAT1 526 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 PARVGQ9HBI0 331 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 OBP2AQ9NY56 170 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 TBX20Q9UMR3 447 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 DERAQ9Y315 318 aa13.96□□□□□ -0.17
PTCH1-218ENST00000548945 ZNF638Q14966 1978 aaKnown RBP13.96□□□□□ -0.18
PTCH1-218ENST00000548945 NPHP3-ACAD11A0A0J9YXS1 232 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 CHRNB1P11230 501 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 GJA1P17302 382 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 WEE1P30291 646 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 LRRC32Q14392 662 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 ARMCX5Q6P1M9 558 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 TSSK4Q6SA08 328 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 GPBP1Q86WP2 473 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 YAF2Q8IY57 180 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 SPEM1Q8N4L4 309 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 CELF5Q8N6W0 485 aaKnown RBP13.95□□□□□ -0.18
PTCH1-218ENST00000548945 CSGALNACT1Q8TDX6 532 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 PSMG2Q969U7 264 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 CALML4Q96GE6 196 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 PGLYRP2Q96PD5 576 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 CRISPLD1Q9H336 500 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 GMEB2Q9UKD1 530 aa13.95□□□□□ -0.18
PTCH1-218ENST00000548945 TIMM13Q9Y5L4 95 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-218ENST00000548945 KIF26AQ9ULI4 1882 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-218ENST00000548945 NCANO14594 1321 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 A0A1W2PRU2 124 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 MTMR11A4FU01 709 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 H3BQV1 296 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 LRP3O75074 770 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 PAPSS2O95340 614 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-218ENST00000548945 BMP15O95972 392 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 CYP11A1P05108 521 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 OR4Q2P0C623 313 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 CCNE1P24864 410 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 UBA7P41226 1012 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 CXCL12P48061 93 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 POU5F1Q01860 360 aaKnown RBP13.94□□□□□ -0.18
PTCH1-218ENST00000548945 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-218ENST00000548945 ITIH5Q86UX2 942 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 MYCT1Q8N699 235 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 SENP8Q96LD8 212 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 MSTO1Q9BUK6 570 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 ASB7Q9H672 318 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 CPSF3Q9UKF6 684 aaKnown RBP13.94□□□□□ -0.18
PTCH1-218ENST00000548945 DSEQ9UL01 958 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 RAB23Q9ULC3 237 aa13.94□□□□□ -0.18
PTCH1-218ENST00000548945 SDK1Q7Z5N4 2213 aa13.93□□□□□ -0.18
PTCH1-218ENST00000548945 ANO9A1A5B4 782 aa13.93□□□□□ -0.18
PTCH1-218ENST00000548945 MYBPHLA2RUH7 354 aa13.93□□□□□ -0.18
PTCH1-218ENST00000548945 K7ENM7 598 aa13.93□□□□□ -0.18
PTCH1-218ENST00000548945 PIRO00625 290 aa13.93□□□□□ -0.18
PTCH1-218ENST00000548945 TRAK2O60296 914 aa13.93□□□□□ -0.18
PTCH1-218ENST00000548945 FAM13AO94988 1023 aa13.93□□□□□ -0.18
PTCH1-218ENST00000548945 TGM1P22735 817 aa13.93□□□□□ -0.18
PTCH1-218ENST00000548945 GJB2P29033 226 aa13.93□□□□□ -0.18
PTCH1-218ENST00000548945 TUFMP49411 452 aaKnown RBP13.93□□□□□ -0.18
PTCH1-218ENST00000548945 GUCY2FP51841 1108 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms