RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SLC20A2Q08357 652 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 SURF1Q15526 300 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 TRIP13Q15645 432 aaPredicted RBP16.47■□□□□ 0.23
BRF1-212ENST00000547562 SGSM1Q2NKQ1 1148 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 TNFAIP8L3Q5GJ75 292 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 CELF3Q5SZQ8 465 aaKnown RBP16.47■□□□□ 0.23
BRF1-212ENST00000547562 ERMARDQ5T6L9 678 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 PLPPR4Q7Z2D5 763 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 OTUD5Q96G74 571 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 FGD4Q96M96 766 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 ROPN1BQ9BZX4 212 aaPredicted RBP16.47■□□□□ 0.23
BRF1-212ENST00000547562 C2orf40Q9H1Z8 148 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 ELP3Q9H9T3 547 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 ROPN1Q9HAT0 212 aaPredicted RBP16.47■□□□□ 0.23
BRF1-212ENST00000547562 CISHQ9NSE2 258 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 SLC25A27O95847 323 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 CHKAP35790 457 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 GJC1P36383 396 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 SLCO1A2P46721 670 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 AUHQ13825 339 aaKnown RBP16.47■□□□□ 0.23
BRF1-212ENST00000547562 MFSD5Q6N075 450 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 ANKS1BQ7Z6G8 1248 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 SCLT1Q96NL6 688 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 XPO6Q96QU8 1125 aaKnown RBP16.47■□□□□ 0.23
BRF1-212ENST00000547562 DDX23Q9BUQ8 820 aaKnown RBP16.47■□□□□ 0.23
BRF1-212ENST00000547562 TRAIPQ9BWF2 469 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 SRCAPQ6ZRS2 3230 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 C5orf60A6NFR6 353 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 TMEM191CA6NGB0 347 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 CPP00450 1065 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 TMEM191BP0C7N4 346 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 CHN1P15882 459 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
BRF1-212ENST00000547562 NF2P35240 595 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 ADCY8P40145 1251 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 IREB2P48200 963 aaKnown RBP16.46■□□□□ 0.23
BRF1-212ENST00000547562 QPCTQ16769 361 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 ARMC9Q7Z3E5 817 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 SULF1Q8IWU6 871 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 OTUD6BQ8N6M0 293 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 DCPSQ96C86 337 aaKnown RBP16.46■□□□□ 0.23
BRF1-212ENST00000547562 SELENOSQ9BQE4 189 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 DDX20Q9UHI6 824 aaKnown RBP16.46■□□□□ 0.23
BRF1-212ENST00000547562 TCRBV5S1A1TA0A578 114 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 ACSL3O95573 720 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 HOXC6P09630 235 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 PROZP22891 400 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 LIG3P49916 1009 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 TRPC3Q13507 836 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 PLCB4Q15147 1175 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 ZNF394Q53GI3 561 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 TSHZ1Q6ZSZ6 1077 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 RHPN2Q8IUC4 686 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 TMEM35BQ8NCS4 154 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 FAM118BQ9BPY3 351 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 ANAPC5Q9UJX4 755 aa16.46■□□□□ 0.23
BRF1-212ENST00000547562 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
BRF1-212ENST00000547562 TFAMQ00059 246 aaKnown RBP16.45■□□□□ 0.22
BRF1-212ENST00000547562 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 NFX1Q12986 1120 aaKnown RBP16.45■□□□□ 0.22
BRF1-212ENST00000547562 C6orf89Q6UWU4 347 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 MPZL3Q6UWV2 235 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 ZNF365Q70YC5 407 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 CCDC89Q8N998 374 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 ZNF518BQ9C0D4 1074 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 TXNRD2Q9NNW7 524 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 ADARB2Q9NS39 739 aaKnown RBP16.45■□□□□ 0.22
BRF1-212ENST00000547562 TTC4O95801 387 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 CETN2P41208 172 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 VPS41P49754 854 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 ZNF699Q32M78 642 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 GPAT2Q6NUI2 795 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 DNAJC24Q6P3W2 148 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 ERO1BQ86YB8 467 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 CCDC125Q86Z20 511 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 RCOR2Q8IZ40 523 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 MICALL1Q8N3F8 863 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 ATXN2LQ8WWM7 1075 aaKnown RBP16.45■□□□□ 0.22
BRF1-212ENST00000547562 CHMP6Q96FZ7 201 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 RBM41Q96IZ5 413 aaKnown RBP16.45■□□□□ 0.22
BRF1-212ENST00000547562 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 SPATA33Q96N06 139 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 MCEEQ96PE7 176 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 JPH2Q9BR39 696 aaPredicted RBP16.45■□□□□ 0.22
BRF1-212ENST00000547562 PTPRHQ9HD43 1115 aa16.45■□□□□ 0.22
BRF1-212ENST00000547562 ACKR2O00590 384 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 CXCL11O14625 94 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 WEE2P0C1S8 567 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 TCF4P15884 667 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 EIF4BP23588 611 aaKnown RBP16.44■□□□□ 0.22
BRF1-212ENST00000547562 CDH5P33151 784 aaPredicted RBP16.44■□□□□ 0.22
BRF1-212ENST00000547562 ASPAP45381 313 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 IFT88Q13099 833 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 LONRF1Q17RB8 773 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 ATP13A4Q4VNC1 1196 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 ATF7IP2Q5U623 682 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 DHX37Q8IY37 1157 aaKnown RBP16.44■□□□□ 0.22
BRF1-212ENST00000547562 THNSL1Q8IYQ7 743 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 BBOF1Q8ND07 529 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 SLITRK1Q96PX8 696 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms