RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CXXC1Q9P0U4 656 aaPredicted RBP16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 POLIQ9UNA4 740 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 CNTN6Q9UQ52 1028 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 PCDHB4Q9Y5E5 795 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 CYB561D2O14569 222 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 NRP1O14786 923 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 SPTLC1O15269 473 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 TADA2AO75478 443 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 SERPING1P05155 500 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 WEE2P0C1S8 567 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 KRT5P13647 590 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 INCA1Q0VD86 236 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 MEA1Q16626 185 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 SCARA3Q6AZY7 606 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 METTL23Q86XA0 190 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 TMTC1Q8IUR5 882 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 LRRC8AQ8IWT6 810 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 TMEM130Q8N3G9 435 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 KAT5Q92993 513 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 SUSD3Q96L08 255 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 RNPC3Q96LT9 517 aaKnown RBP16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 ZNF558Q96NG5 402 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 ARID3AQ99856 593 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 BAG1Q99933 345 aaPredicted RBP16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 PAAF1Q9BRP4 392 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 DNAJB4Q9UDY4 337 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 STK39Q9UEW8 545 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 AJAP1Q9UKB5 411 aaPredicted RBP16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 ADAM28Q9UKQ2 775 aa16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 BARX2Q9UMQ3 279 aaPredicted RBP16.93■□□□□ 0.3
TRAFD1-203ENST00000547063 COL4A6Q14031 1691 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 M0QZQ0 153 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 GFPT2O94808 682 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 KIF4AO95239 1232 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 GALTP07902 379 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 CD58P19256 250 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 ACO1P21399 889 aaKnown RBP16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 PPM1AP35813 382 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 PRKCIP41743 596 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 LHX1P48742 406 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 SLC11A1P49279 550 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 BCAR1P56945 870 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 PTK2Q05397 1052 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 KLHL30Q0D2K2 578 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 SOWAHAQ2M3V2 549 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 HS1BP3Q53T59 392 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 TMEM270Q6UE05 265 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 CYP26C1Q6V0L0 522 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 LIMS2Q7Z4I7 341 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 VPS36Q86VN1 386 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 UNC93AQ86WB7 457 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 FIBCD1Q8N539 461 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 UBR7Q8N806 425 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 C3orf58Q8NDZ4 430 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 ELMO3Q96BJ8 720 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 TRIM44Q96DX7 344 aaPredicted RBP16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 UBE2OQ9C0C9 1292 aaKnown RBP16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 GPR88Q9GZN0 384 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 SNX25Q9H3E2 840 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 CWH43Q9H720 699 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 SMYD3Q9H7B4 428 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 PRG3Q9Y2Y8 225 aaPredicted RBP16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 SF3B1O75533 1304 aaKnown RBP eCLIP16.92■□□□□ 0.31e-7■■■■■ 31.2
TRAFD1-203ENST00000547063 PTPRSQ13332 1948 aa16.92■□□□□ 0.3
TRAFD1-203ENST00000547063 TLL1O43897 1013 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 B4GALT3O60512 393 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 CILPO75339 1184 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 CYP11A1P05108 521 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 PAEPP09466 180 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 TYMPP19971 482 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 FECHP22830 423 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 WARSP23381 471 aaKnown RBP16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 ANXA13P27216 316 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 RGS19P49795 217 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 GOLGA8FQ08AF8 430 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 GOLGA8DPQ0D2H9 430 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 TIGD5Q53EQ6 642 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 TDRD12Q587J7 1177 aaKnown RBP16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 KCNT2Q6UVM3 1135 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 TMCO2Q7Z6W1 182 aaPredicted RBP16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 ADGRF2Q8IZF7 708 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 RBBP8NLQ8NC74 664 aaPredicted RBP16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 NT5C1AQ9BXI3 368 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 CACNG4Q9UBN1 327 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 KIAA1257Q9ULG3 409 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 PCDHB8Q9UN66 801 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 RWDD3Q9Y3V2 267 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 PCDHB12Q9Y5F1 795 aa16.91■□□□□ 0.3
TRAFD1-203ENST00000547063 SSU72P8A0A1W2PR75 194 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 SYN3O14994 580 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 DEKP35659 375 aaKnown RBP16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 GNL1P36915 607 aaPredicted RBP16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 PDE6CP51160 858 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 CDH8P55286 799 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 ARID5AQ03989 594 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 IRF2BP2Q7Z5L9 587 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 ZNF677Q86XU0 584 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 PDCL2Q8N4E4 241 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 OR6B3Q8NGW1 331 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 SP7Q8TDD2 431 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms