RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 C4orf50Q6ZRC1 276 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 ARID3BQ8IVW6 561 aaPredicted RBP12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 FUKQ8N0W3 1084 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 BEST2Q8NFU1 509 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 ATXN2LQ8WWM7 1075 aaKnown RBP12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 PGM2Q96G03 612 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 ANKRD27Q96NW4 1050 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 MYBL2P10244 700 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 KPNB1Q14974 876 aaKnown RBP12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 FASTKD1Q53R41 847 aaKnown RBP12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 LRRC8EQ6NSJ5 796 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 FAM193BQ96PV7 902 aaPredicted RBP12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 MEGF6O75095 1541 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 ADCY3O60266 1144 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 CYP11B1P15538 503 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 CHI3L2Q15782 390 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 SMIM5Q71RC9 77 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 TMEM139Q8IV31 216 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 NDUFAF2Q8N183 169 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 PGBD4Q96DM1 585 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 CRAMP1Q96RY5 1269 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 ZBTB18Q99592 522 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 ACAD9Q9H845 621 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 DONSONQ9NYP3 566 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 EXTL3O43909 919 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 ZNF189O75820 626 aaPredicted RBP12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 HNRNPCP07910 306 aaKnown RBP eCLIP12.81□□□□□ -0.365e-6■■■□□ 18.1
NPC1L1-204ENST00000546276 SPDYCQ5MJ68 293 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 C16orf89Q6UX73 402 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 KIRREL3Q8IZU9 778 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 SLC20A1Q8WUM9 679 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 TMEM143Q96AN5 459 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 CLMNQ96JQ2 1002 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 FAM111AQ96PZ2 611 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 RIOX1Q9H6W3 641 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 GRID1Q9ULK0 1009 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 SNX5Q9Y5X3 404 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 TRIM49D1C9J1S8 452 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 HUS1O60921 280 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 PRKCBP05771 671 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 NT5DC3Q86UY8 548 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 MREGQ8N565 214 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 FRMD8Q9BZ67 464 aaPredicted RBP12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 FNDC3AQ9Y2H6 1198 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 SPP2Q13103 211 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 ITPK1Q13572 414 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 DSTYKQ6XUX3 929 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 FAM71DQ8N9W8 422 aa12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 FAM49AQ9H0Q0 323 aaPredicted RBP12.81□□□□□ -0.36
NPC1L1-204ENST00000546276 DSG1Q02413 1049 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 TMEM119Q4V9L6 283 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 GPAT2Q6NUI2 795 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 RNF149Q8NC42 400 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 PBXIP1Q96AQ6 731 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 ZNF668Q96K58 619 aaPredicted RBP12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 KIF9Q9HAQ2 790 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 ANKEF1Q9NU02 776 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 IRAK4Q9NWZ3 460 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 TBX20Q9UMR3 447 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 IGSF9BQ9UPX0 1349 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 NEMP1O14524 444 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 C21orf2O43822 256 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 ENO3P13929 434 aaPredicted RBP12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 MUTP22033 750 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 IL10P22301 178 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 GTF2H1P32780 548 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 IFI35P80217 286 aaPredicted RBP12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 SMTNL2Q2TAL5 461 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 RSPH3Q86UC2 560 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 UNC45AQ9H3U1 944 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 BLOC1S4Q9NUP1 217 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 GGA2Q9UJY4 613 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 ARHGEF37A1IGU5 675 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 ATP9BO43861 1147 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 ENTPD3O75355 529 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 E2F6O75461 281 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 ADORA2BP29275 332 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 SREBF1P36956 1147 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 RPL21P46778 160 aaKnown RBP12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 CCDC134Q9H6E4 229 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 CACYBPQ9HB71 228 aaKnown RBP12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 KCNH7Q9NS40 1196 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 NAALADL1Q9UQQ1 740 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 C15orf41Q9Y2V0 281 aa12.8□□□□□ -0.36
NPC1L1-204ENST00000546276 RCCD1A6NED2 376 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 A8MXQ7 604 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 PTPN4P29074 926 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 SERPINB3P29508 390 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 HABP4Q5JVS0 413 aaKnown RBP12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 C1orf131Q8NDD1 294 aaKnown RBP12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 EME1Q96AY2 570 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 OLFML3Q9NRN5 406 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 DDX3XO00571 662 aaKnown RBP eCLIP12.79□□□□□ -0.363e-19■■■□□ 15.3
NPC1L1-204ENST00000546276 PBX1P40424 430 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 ITGB3BPQ13352 177 aaPredicted RBP12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 EMC2Q15006 297 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 STILQ15468 1287 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 CCNG2Q16589 344 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms