RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	SMG8	Q8ND04	991 aa	Known RBP	7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	TMEM161B	Q8NDZ6	487 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	CNNM3	Q8NE01	707 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	PHOSPHO2	Q8TCD6	241 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	NOC3L	Q8WTT2	800 aa	Known RBP	7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	RABGGTA	Q92696	567 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	PAGE5	Q96GU1	130 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	MFSD14A	Q96MC6	490 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	RAD9A	Q99638	391 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	TCHP	Q9BT92	498 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	TRIM9	Q9C026	710 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	LACRT	Q9GZZ8	138 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	C2orf40	Q9H1Z8	148 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	FZD8	Q9H461	694 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	PRDM12	Q9H4Q4	367 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	PDZD7	Q9H5P4	517 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	MRPL44	Q9H9J2	332 aa	Known RBP	7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	PRMT7	Q9NVM4	692 aa	Predicted RBP	7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	SNTG2	Q9NY99	539 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	DACT1	Q9NYF0	836 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	LARS	Q9P2J5	1176 aa	Known RBP	7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	PARP2	Q9UGN5	583 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	ODF2L	Q9ULJ1	636 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	HPSE	Q9Y251	543 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	IPP	Q9Y573	584 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	INSL6	Q9Y581	213 aa		7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	7.06	□□□□□ -1.28
TAF1D-222	ENST00000546088	CHD9	Q3L8U1	2897 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088		A0A0U1RQF3	1178 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	NT5C1B-RDH14	C9J2C7	533 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	ACKR2	O00590	384 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	SLC26A4	O43511	780 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	PRPF6	O94906	941 aa	Known RBP	7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	POMC	P01189	267 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	STAG3L1	P0CL83	205 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	FOSL1	P15407	271 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	MLH1	P40692	756 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	PREP	P48147	710 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	NCBP1	Q09161	790 aa	Known RBP	7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	STRN3	Q13033	797 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	COASY	Q13057	564 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	RAB30	Q15771	203 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	ATF7IP2	Q5U623	682 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	ISM2	Q6H9L7	571 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	AGMO	Q6ZNB7	445 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	LRRC55	Q6ZSA7	311 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	TREML1	Q86YW5	311 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	THNSL1	Q8IYQ7	743 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	FIBCD1	Q8N539	461 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	UBASH3B	Q8TF42	649 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	GDPD5	Q8WTR4	605 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	PPM1E	Q8WY54	764 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	MYLIP	Q8WY64	445 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	FIZ1	Q96SL8	496 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	TNMD	Q9H2S6	317 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	SLC39A2	Q9NP94	309 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	C1orf112	Q9NSG2	853 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	TYW1	Q9NV66	732 aa	Known RBP	7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	KBTBD4	Q9NVX7	518 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	TMEM161A	Q9NX61	479 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	MIOS	Q9NXC5	875 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	KCND2	Q9NZV8	630 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	ARHGAP28	Q9P2N2	729 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	PCDHA11	Q9Y5I1	949 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	MRPL42	Q9Y6G3	142 aa	Known RBP	7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	COL4A6	Q14031	1691 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	KIAA1671	Q9BY89	1806 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	PHLPP2	Q6ZVD8	1323 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	CNTNAP2	Q9UHC6	1331 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	NLRC5	Q86WI3	1866 aa		7.05	□□□□□ -1.28
TAF1D-222	ENST00000546088	REV3L	O60673	3130 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088		A0A1B0GUA9	196 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088		A0A1W2PQ27	194 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088		A0A1W2PQ64	194 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088		A0A1W2PQD8	194 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	ANKRD63	C9JTQ0	380 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	ADAM11	O75078	769 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.04	□□□□□ -1.28	6e-13	■■■□□ 14.8
TAF1D-222	ENST00000546088	SLFN14	P0C7P3	912 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	ITGA4	P13612	1032 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	CTNNB1	P35222	781 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	ZNF131	P52739	623 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	NCKAP1L	P55160	1127 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	HTRA4	P83105	476 aa	Predicted RBP	7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	POU5F1B	Q06416	359 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	SPAG1	Q07617	926 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	PNOC	Q13519	176 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	ZNF568	Q3ZCX4	644 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	GLRA4	Q5JXX5	417 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	ZBTB41	Q5SVQ8	909 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	CEP135	Q66GS9	1140 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	SLC27A1	Q6PCB7	646 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	KRBA2	Q6ZNG9	492 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	NELFCD	Q8IXH7	590 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	CCDC65	Q8IXS2	484 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	ZSWIM2	Q8NEG5	633 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	ZNF689	Q96CS4	500 aa	Predicted RBP	7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	CASD1	Q96PB1	797 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	GAD1	Q99259	594 aa		7.04	□□□□□ -1.28
TAF1D-222	ENST00000546088	ACO2	Q99798	780 aa	Known RBP	7.04	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms