RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 NXF1Q9UBU9 619 aaKnown RBP17.5■□□□□ 0.39
LIMS2-217ENST00000545738 AJAP1Q9UKB5 411 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-217ENST00000545738 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-217ENST00000545738 TMEM265A0A087WTH1 108 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 LGALS16A8MUM7 142 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 HIDE1A8MVS5 230 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 C2CD2LO14523 706 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 CYB561D2O14569 222 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 LILRB3O75022 631 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 PNPLA4P41247 253 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 CDH8P55286 799 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 FANCCQ00597 558 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 CCDC142Q17RM4 750 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 KIAA0319Q5VV43 1072 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 GJB7Q6PEY0 223 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 OSTM1Q86WC4 334 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 CEP57Q86XR8 500 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 ARHGEF19Q8IW93 802 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 PDCL2Q8N4E4 241 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 INTS2Q9H0H0 1204 aaKnown RBP17.49■□□□□ 0.39
LIMS2-217ENST00000545738 LZTS1Q9Y250 596 aa17.49■□□□□ 0.39
LIMS2-217ENST00000545738 A0A1B0GTH6 734 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 GOLGA6L19H0YKK7 550 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 PES1O00541 588 aaKnown RBP17.48■□□□□ 0.39
LIMS2-217ENST00000545738 FSCN2O14926 492 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 P4HA2O15460 535 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 ADAM12O43184 909 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 RPL17P18621 184 aaKnown RBP17.48■□□□□ 0.39
LIMS2-217ENST00000545738 PON1P27169 355 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 ATICP31939 592 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 KRT17Q04695 432 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 MRPL58Q14197 206 aaKnown RBP17.48■□□□□ 0.39
LIMS2-217ENST00000545738 PTPN14Q15678 1187 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 SGSM1Q2NKQ1 1148 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 PHLDB3Q6NSJ2 640 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 TRIM65Q6PJ69 517 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 DSTYKQ6XUX3 929 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 LNX1Q8TBB1 728 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-217ENST00000545738 TCF25Q9BQ70 676 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 MRPL45Q9BRJ2 306 aaKnown RBP17.48■□□□□ 0.39
LIMS2-217ENST00000545738 RTN4Q9NQC3 1192 aaKnown RBP17.48■□□□□ 0.39
LIMS2-217ENST00000545738 TLR9Q9NR96 1032 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 PCDHB8Q9UN66 801 aa17.48■□□□□ 0.39
LIMS2-217ENST00000545738 EPHB6O15197 1021 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 N4BP1O75113 896 aaKnown RBP17.47■□□□□ 0.39
LIMS2-217ENST00000545738 CTSAP10619 480 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 CDR1P51861 262 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 DSG1Q02413 1049 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 MYO1EQ12965 1108 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 USP41Q3LFD5 358 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 VARS2Q5ST30 1063 aaKnown RBP17.47■□□□□ 0.39
LIMS2-217ENST00000545738 ZNF697Q5TEC3 545 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 PLPP4Q5VZY2 271 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
LIMS2-217ENST00000545738 ADGRD2Q7Z7M1 963 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 EHBP1Q8NDI1 1231 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 TMEM209Q96SK2 561 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 TTPALQ9BTX7 342 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 HMGXB4Q9UGU5 601 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 SIK3Q9Y2K2 1263 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 GTPBP10A4D1E9 387 aaKnown RBP17.47■□□□□ 0.39
LIMS2-217ENST00000545738 TBC1D4O60343 1298 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 CYP11A1P05108 521 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 WEE2P0C1S8 567 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 UBE3AQ05086 875 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 EXOC3L4Q17RC7 722 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 ZNF667Q5HYK9 610 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 OR10T2Q8NGX3 314 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 RIN2Q8WYP3 895 aaPredicted RBP17.47■□□□□ 0.39
LIMS2-217ENST00000545738 BCO2Q9BYV7 579 aa17.47■□□□□ 0.39
LIMS2-217ENST00000545738 SYN3O14994 580 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 LMO2P25791 158 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 GLUD2P49448 558 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 NR1I3Q14994 352 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 GBP6Q6ZN66 633 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 RRAGAQ7L523 313 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 TMC7Q7Z402 723 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 KREMEN1Q96MU8 473 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 GUCD1Q96NT3 240 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 MMS19Q96T76 1030 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 NIF3L1Q9GZT8 377 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 IFNKQ9P0W0 207 aa17.46■□□□□ 0.39
LIMS2-217ENST00000545738 PLXNA3P51805 1871 aa17.46■□□□□ 0.38
LIMS2-217ENST00000545738 CARNS1A5YM72 827 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 C2orf71A6NGG8 1288 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 GABRDO14764 452 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 TRAPPC3O43617 180 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 NOL4O94818 638 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 ODC1P11926 461 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 UBXN1Q04323 297 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 ELAVL2Q12926 359 aaKnown RBP17.45■□□□□ 0.38
LIMS2-217ENST00000545738 ADGRF2Q8IZF7 708 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 TOP6BLQ8N6T0 577 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 PIK3R5Q8WYR1 880 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 TAF4BQ92750 862 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 TWNKQ96RR1 684 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 LPIN3Q9BQK8 851 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 CLSTN3Q9BQT9 956 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 ENTPD7Q9NQZ7 604 aa17.45■□□□□ 0.38
LIMS2-217ENST00000545738 CLSTN1O94985 981 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms