RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 DDX12PQ92771 950 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 TNFRSF25Q93038 417 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 ZNF274Q96GC6 653 aaPredicted RBP10.29□□□□□ -0.76
CHD4-212ENST00000545083 TBC1D32Q96NH3 1257 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 SMG9Q9H0W8 520 aaKnown RBP10.29□□□□□ -0.76
CHD4-212ENST00000545083 FBRSL1Q9HCM7 1045 aaKnown RBP10.29□□□□□ -0.76
CHD4-212ENST00000545083 MAFFQ9ULX9 164 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 TNFSF13BQ9Y275 285 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 IGSF10Q6WRI0 2623 aa10.29□□□□□ -0.76
CHD4-212ENST00000545083 LOC400499M0QZD8 3231 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 KIF26AQ9ULI4 1882 aaPredicted RBP10.28□□□□□ -0.76
CHD4-212ENST00000545083 PATE3B3GLJ2 98 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 TAF4O00268 1085 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 DPYSL4O14531 572 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 CDX4O14627 284 aaPredicted RBP10.28□□□□□ -0.76
CHD4-212ENST00000545083 RNF40O75150 1001 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 SOAT2O75908 522 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 EGFP01133 1207 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 KCNE1P15382 129 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 CYP11B2P19099 503 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 CSRP1P21291 193 aaKnown RBP10.28□□□□□ -0.76
CHD4-212ENST00000545083 MCM4P33991 863 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 YARSP54577 528 aaKnown RBP10.28□□□□□ -0.76
CHD4-212ENST00000545083 CYP4F8P98187 520 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 DUSP4Q13115 394 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 ITPRIPL2Q3MIP1 535 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 GPR158Q5T848 1215 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 DAB2IPQ5VWQ8 1189 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 NAIF1Q69YI7 327 aaPredicted RBP10.28□□□□□ -0.76
CHD4-212ENST00000545083 KIAA1211LQ6NV74 962 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 PADI6Q6TGC4 694 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 RUFY3Q7L099 469 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 HAUS6Q7Z4H7 955 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 TTC9BQ8N6N2 239 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 BPIFB1Q8TDL5 484 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 MTMR9Q96QG7 549 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 CCDC94Q9BW85 323 aaPredicted RBP10.28□□□□□ -0.76
CHD4-212ENST00000545083 ATXN3LQ9H3M9 355 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 PTPRHQ9HD43 1115 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 HPS4Q9NQG7 708 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 SLC38A7Q9NVC3 462 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 OBP2AQ9NY56 170 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 SLC27A5Q9Y2P5 690 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 TIMM13Q9Y5L4 95 aaPredicted RBP10.28□□□□□ -0.76
CHD4-212ENST00000545083 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
CHD4-212ENST00000545083 ASCC3Q8N3C0 2202 aaKnown RBP10.27□□□□□ -0.76
CHD4-212ENST00000545083 ABCA7Q8IZY2 2146 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 ABLIM1O14639 778 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 TRDMT1O14717 391 aaKnown RBP10.27□□□□□ -0.77
CHD4-212ENST00000545083 HYAL3O43820 417 aaPredicted RBP10.27□□□□□ -0.77
CHD4-212ENST00000545083 CEACAM1P13688 526 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 PSMA5P28066 241 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 GABRR2P28476 465 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 RPL9P32969 192 aaKnown RBP10.27□□□□□ -0.77
CHD4-212ENST00000545083 SCRN1Q12765 414 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 PLD1Q13393 1074 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 ELF2Q15723 593 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 ZNF568Q3ZCX4 644 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 TRIM68Q6AZZ1 485 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 TAS1R3Q7RTX0 852 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 DNAJB7Q7Z6W7 309 aaPredicted RBP10.27□□□□□ -0.77
CHD4-212ENST00000545083 CAMKK1Q8N5S9 505 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 ATAD1Q8NBU5 361 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 DEFB124Q8NES8 71 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 APPL2Q8NEU8 664 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 EZH1Q92800 747 aaPredicted RBP10.27□□□□□ -0.77
CHD4-212ENST00000545083 COL26A1Q96A83 441 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 ACO2Q99798 780 aaKnown RBP10.27□□□□□ -0.77
CHD4-212ENST00000545083 FAM83CQ9BQN1 747 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
CHD4-212ENST00000545083 TMEM60Q9H2L4 133 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 ZSWIM6Q9HCJ5 1215 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 TUFT1Q9NNX1 390 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 TMEM9BQ9NQ34 198 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 TOPORSQ9NS56 1045 aaPredicted RBP10.27□□□□□ -0.77
CHD4-212ENST00000545083 GKN1Q9NS71 199 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 CNTN3Q9P232 1028 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 TUBGCP4Q9UGJ1 667 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 KLK13Q9UKR3 277 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 INVSQ9Y283 1065 aa10.27□□□□□ -0.77
CHD4-212ENST00000545083 ARHGEF35A5YM69 484 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 M0QZQ0 153 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 NEMFO60524 1076 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 ATG13O75143 517 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 RHOBTB1O94844 696 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 OAZ2O95190 189 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 U2AF2P26368 475 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHD4-212ENST00000545083 MCM2P49736 904 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 EFNA5P52803 228 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 EPHB3P54753 998 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 YWHAHQ04917 246 aaPredicted RBP10.26□□□□□ -0.77
CHD4-212ENST00000545083 GRSF1Q12849 480 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHD4-212ENST00000545083 PPP2R5AQ15172 486 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 CENPPQ6IPU0 288 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 CPLX2Q6PUV4 134 aaKnown RBP10.26□□□□□ -0.77
CHD4-212ENST00000545083 RIN3Q8TB24 985 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 PSMG2Q969U7 264 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 NACC1Q96RE7 527 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 TARS2Q9BW92 718 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms