RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 ZNF786Q8N393 782 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 USP33Q8TEY7 942 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 RFFLQ8WZ73 363 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CAAP1Q9H8G2 361 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 PPCSQ9HAB8 311 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 LINC00854A0A1B0GVQ3 168 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 DGKIO75912 1065 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 MFSD4BQ5TF39 518 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 ECSITQ9BQ95 431 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CARD9Q9H257 536 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 TUBGCP4Q9UGJ1 667 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 SPACA6W5XKT8 324 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 NDUFB5O43674 189 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 GYS1P13807 737 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 FLT3P36888 993 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 DSG1Q02413 1049 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 TMEM179Q6ZVK1 233 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CENPLQ8N0S6 344 aaPredicted RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CARD14Q9BXL6 1004 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 MARCOQ9UEW3 520 aaPredicted RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 EIF3LQ9Y262 564 aaKnown RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 INSRP06213 1382 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 TRPC5OSA6NMA1 111 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CFAP99D6REC4 459 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 RTN2O75298 545 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CYP19A1P11511 503 aaPredicted RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 SSTR3P32745 418 aaPredicted RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 FAM83BQ5T0W9 1011 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 TMC5Q6UXY8 1006 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 DPP10Q8N608 796 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 LRRC39Q96DD0 335 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 AGAP3Q96P47 875 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 RMDN3Q96TC7 470 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 HDHD2Q9H0R4 259 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 AVENQ9NQS1 362 aaPredicted RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 HOXC10Q9NYD6 342 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CTNNAL1Q9UBT7 734 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 LOC102724159A0A0B4J2E5 919 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 SAC3D1A6NKF1 404 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 E9PBE3 544 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 GRIN3BO60391 1043 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 FEN1P39748 380 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 YWHAZP63104 245 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 MRPS35P82673 323 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 BYSLQ13895 437 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PWP2Q15269 919 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 IL31Q6EBC2 164 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 SDE2Q6IQ49 451 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 FOXP4Q8IVH2 680 aaPredicted RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 RNASE11Q8TAA1 199 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 ARHGEF26Q96DR7 871 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PUS3Q9BZE2 481 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 FHOD1Q9Y613 1164 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 HEATR9A2RTY3 570 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 SPRP35270 261 aaPredicted RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 NFIL3Q16649 462 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PPP1R18Q6NYC8 613 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 CASP10Q92851 521 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 AGPAT1Q99943 283 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PIGUQ9H490 435 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 RBAKQ9NYW8 714 aaPredicted RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PDP2Q9P2J9 529 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 RNF123Q5XPI4 1314 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 C1orf167Q5SNV9 1468 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PVALEFA0A1B0GWK0 134 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 EEF2KO00418 725 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PHF2O75151 1096 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PTK7Q13308 1070 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 ADRM1Q16186 407 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 CHSY1Q86X52 802 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 TRIM48Q8IWZ4 208 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 KCTD17Q8N5Z5 321 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 EPS8L2Q9H6S3 715 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 RMND5AQ9H871 391 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 IL1RAPL1Q9NZN1 696 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 HERC5Q9UII4 1024 aaKnown RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 TMCC3Q9ULS5 477 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 SNPHO15079 494 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 CACHD1Q5VU97 1274 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 ZNF589Q86UQ0 364 aaPredicted RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 JADE3Q92613 823 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 CDY2AQ9Y6F7 541 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 CDY1Q9Y6F8 540 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 B2RBV5 119 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 VWA5AO00534 786 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 BBOX1O75936 387 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PHKG2P15735 406 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 POU4F1Q01851 419 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 CDC16Q13042 620 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 TXNRD1Q16881 649 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 SRLQ86TD4 932 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms