RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 TRAPPC11Q7Z392 1133 aa23.48■■□□□ 1.35
OTUB1-212ENST00000543988 NECTIN4Q96NY8 510 aa23.48■■□□□ 1.35
OTUB1-212ENST00000543988 ZDHHC7Q9NXF8 308 aa23.48■■□□□ 1.35
OTUB1-212ENST00000543988 ARHGEF37A1IGU5 675 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 C19orf67A6NJJ6 358 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 PAPLNO95428 1278 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 SSTR3P32745 418 aaPredicted RBP23.47■■□□□ 1.35
OTUB1-212ENST00000543988 ATAT1Q5SQI0 421 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 WSCD1Q658N2 575 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 ISM2Q6H9L7 571 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 GJD3Q8N144 294 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 SLC7A14Q8TBB6 771 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 PARD3BQ8TEW8 1205 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 ZNF516Q92618 1163 aa23.47■■□□□ 1.35
OTUB1-212ENST00000543988 OR6C75A6NL08 312 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 LRRIQ3A6PVS8 624 aaPredicted RBP23.46■■□□□ 1.35
OTUB1-212ENST00000543988 AKAP3O75969 853 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 ABLIM3O94929 683 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 OR4Q2P0C623 313 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 CPB1P15086 417 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 EDRF1Q3B7T1 1238 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 ADSSL1Q8N142 457 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 ZNF461Q8TAF7 563 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 SMG7Q92540 1137 aaKnown RBP23.46■■□□□ 1.35
OTUB1-212ENST00000543988 RPGRIP1Q96KN7 1286 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 GTPBP4Q9BZE4 634 aaKnown RBP23.46■■□□□ 1.35
OTUB1-212ENST00000543988 DSEQ9UL01 958 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 FRMD4BQ9Y2L6 1034 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 C5orf42Q9H799 3197 aa23.46■■□□□ 1.35
OTUB1-212ENST00000543988 TNFRSF10AO00220 468 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 BIN1O00499 593 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 BMP6P22004 513 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 SP100P23497 879 aaPredicted RBP23.45■■□□□ 1.34
OTUB1-212ENST00000543988 CLDN10P78369 228 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 PPM1LQ5SGD2 360 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 OR10T2Q8NGX3 314 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 HPDLQ96IR7 371 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 RTP3Q9BQQ7 232 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 OXCT2Q9BYC2 517 aaPredicted RBP23.45■■□□□ 1.34
OTUB1-212ENST00000543988 RHOBTB2Q9BYZ6 727 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 PRKD2Q9BZL6 878 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 L1RE1Q9UN81 338 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 SCN1AP35498 2009 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 TSC2P49815 1807 aa23.45■■□□□ 1.34
OTUB1-212ENST00000543988 LOC730098B7Z3J9 87 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 HNRNPA1P09651 372 aaKnown RBP eCLIP23.44■■□□□ 1.34
OTUB1-212ENST00000543988 RPL13P26373 211 aaKnown RBP23.44■■□□□ 1.34
OTUB1-212ENST00000543988 PMS1P54277 932 aaKnown RBP23.44■■□□□ 1.34
OTUB1-212ENST00000543988 DLG4P78352 724 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 MYO1EQ12965 1108 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 MORC3Q14149 939 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 CAMK4Q16566 473 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 TPGS2Q68CL5 300 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 CENPPQ6IPU0 288 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 METTL23Q86XA0 190 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 PDCL2Q8N4E4 241 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 TMC2Q8TDI7 906 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 EEF2KMTQ96G04 330 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 TMEM209Q96SK2 561 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 GDAP2Q9NXN4 497 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 R3HCC1Q9Y3T6 440 aaKnown RBP23.44■■□□□ 1.34
OTUB1-212ENST00000543988 SNX9Q9Y5X1 595 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 MUC3AQ02505 3323 aa23.44■■□□□ 1.34
OTUB1-212ENST00000543988 MAPK13O15264 365 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 CCL16O15467 120 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 SEC24AO95486 1093 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 VNN2O95498 520 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 ATF2P15336 505 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 CD44P16070 742 aaKnown RBP23.43■■□□□ 1.34
OTUB1-212ENST00000543988 HOXA9P31269 272 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 ADAM9Q13443 819 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 C1orf220Q5T0J3 134 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 TDRD10Q5VZ19 366 aaKnown RBP23.43■■□□□ 1.34
OTUB1-212ENST00000543988 CYP26C1Q6V0L0 522 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 RNF19BQ6ZMZ0 732 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 CCDC149Q6ZUS6 474 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 FAM186BQ8IYM0 893 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 GBP4Q96PP9 640 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 LMBRD1Q9NUN5 540 aa23.43■■□□□ 1.34
OTUB1-212ENST00000543988 AFF4Q9UHB7 1163 aaKnown RBP23.43■■□□□ 1.34
OTUB1-212ENST00000543988 PRRG1O14668 218 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 HUS1O60921 280 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 PSMC2P35998 433 aaKnown RBP23.42■■□□□ 1.34
OTUB1-212ENST00000543988 ADCY1Q08828 1119 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 BIRC3Q13489 604 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 UVSSAQ2YD98 709 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 TCEAL8Q8IYN2 117 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 PGLYRP2Q96PD5 576 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 TSG101Q99816 390 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 CLSTN2Q9H4D0 955 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 PIDD1Q9HB75 910 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 CYP4F11Q9HBI6 524 aa23.42■■□□□ 1.34
OTUB1-212ENST00000543988 CLUHO75153 1309 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 TRIM49BA6NDI0 452 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 PSMA7O14818 248 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 CST3P01034 146 aaPredicted RBP23.41■■□□□ 1.34
OTUB1-212ENST00000543988 POU2F2P09086 479 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 ELF1P32519 619 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 AP3M2P53677 418 aa23.41■■□□□ 1.34
OTUB1-212ENST00000543988 GPR17Q13304 367 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms