RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MAP7D3Q8IWC1 876 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 RBM15BQ8NDT2 890 aaKnown RBP13.36□□□□□ -0.27
SMG8-202ENST00000543872 STKLD1Q8NE28 680 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 WDR66Q8TBY9 1149 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 PSPC1Q8WXF1 523 aaKnown RBP13.36□□□□□ -0.27
SMG8-202ENST00000543872 EMSYQ7Z589 1322 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 ZBTB39O15060 712 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 PPP1R11O60927 126 aaPredicted RBP13.36□□□□□ -0.27
SMG8-202ENST00000543872 VIL1P09327 827 aaKnown RBP13.36□□□□□ -0.27
SMG8-202ENST00000543872 RARBP10826 455 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 CDK16Q00536 496 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 GRIK5Q16478 980 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 LLGL2Q6P1M3 1020 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 GLIS1Q8NBF1 620 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 SMC1BQ8NDV3 1235 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 ERMNQ8TAM6 284 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 TTC25Q96NG3 672 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 PANX3Q96QZ0 392 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 TUBGCP4Q9UGJ1 667 aa13.36□□□□□ -0.27
SMG8-202ENST00000543872 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 A8MXQ7 604 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 ZNF862O60290 1169 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 HIRAP54198 1017 aaPredicted RBP13.35□□□□□ -0.27
SMG8-202ENST00000543872 BTKQ06187 659 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 ADGRF4Q8IZF3 695 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 SHKBP1Q8TBC3 707 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 ZNF287Q9HBT7 754 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 KLHL11Q9NVR0 708 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 TYROBPO43914 113 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 IFNB1P01574 187 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 PABPC4LP0CB38 370 aaKnown RBP13.35□□□□□ -0.27
SMG8-202ENST00000543872 KITP10721 976 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 EEF2P13639 858 aaKnown RBP13.35□□□□□ -0.27
SMG8-202ENST00000543872 PLOD1Q02809 727 aaPredicted RBP13.35□□□□□ -0.27
SMG8-202ENST00000543872 LMNB2Q03252 620 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 MMEL1Q495T6 779 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 SFT2D3Q587I9 215 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 RBM44Q6ZP01 1051 aaKnown RBP13.35□□□□□ -0.27
SMG8-202ENST00000543872 JMJD4Q9H9V9 463 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 IL1RAPL1Q9NZN1 696 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 ZNF148Q9UQR1 794 aa13.35□□□□□ -0.27
SMG8-202ENST00000543872 USP17L10C9JJH3 530 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 BGNP21810 368 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 ADARP55265 1226 aaKnown RBP13.34□□□□□ -0.27
SMG8-202ENST00000543872 ERFEQ4G0M1 354 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 KCTD1Q719H9 257 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 PTF1AQ7RTS3 328 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 OR6Y1Q8NGX8 325 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 MORC4Q8TE76 937 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 OXNAD1Q96HP4 312 aaPredicted RBP13.34□□□□□ -0.27
SMG8-202ENST00000543872 FHDC1Q9C0D6 1143 aaPredicted RBP13.34□□□□□ -0.27
SMG8-202ENST00000543872 UNC45AQ9H3U1 944 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 DLEC1Q9Y238 1755 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 SPDYE16A6NNV3 312 aaPredicted RBP13.34□□□□□ -0.27
SMG8-202ENST00000543872 CHMP2AO43633 222 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 SPATA31C1P0DKV0 1188 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 ATP6V1B1P15313 513 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 COG7P83436 770 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 ASPHQ12797 758 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 DLG1Q12959 904 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 SLC26A7Q8TE54 656 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 CORO1BQ9BR76 489 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 MARCOQ9UEW3 520 aaPredicted RBP13.34□□□□□ -0.27
SMG8-202ENST00000543872 MTO1Q9Y2Z2 717 aaKnown RBP13.34□□□□□ -0.27
SMG8-202ENST00000543872 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 A0A0J9YVX5 310 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 MEI4A8MW99 385 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 MAN1A1P33908 653 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 EPHB1P54762 984 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 GPS1Q13098 491 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 OLFML1Q6UWY5 402 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 SYDE1Q6ZW31 735 aaPredicted RBP13.34□□□□□ -0.27
SMG8-202ENST00000543872 TREML1Q86YW5 311 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 TPH2Q8IWU9 490 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 ULK2Q8IYT8 1036 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 GSTCDQ8NEC7 633 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 SLCO2A1Q92959 643 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 SLC7A8Q9UHI5 535 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 PAIP2BQ9ULR5 123 aaKnown RBP13.34□□□□□ -0.27
SMG8-202ENST00000543872 GMEB1Q9Y692 573 aa13.34□□□□□ -0.27
SMG8-202ENST00000543872 PNMA6FA0A0J9YX94 578 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 TISP43B9A030 160 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 E2F6O75461 281 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 NTSR2O95665 410 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 ALOX15P16050 662 aaPredicted RBP13.33□□□□□ -0.27
SMG8-202ENST00000543872 CD58P19256 250 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 SSTR1P30872 391 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 HPCAP84074 193 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 BTG3Q14201 252 aaPredicted RBP13.33□□□□□ -0.27
SMG8-202ENST00000543872 TBC1D9BQ66K14 1250 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 ZBTB8BQ8NAP8 495 aaPredicted RBP13.33□□□□□ -0.27
SMG8-202ENST00000543872 BBOF1Q8ND07 529 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.27
SMG8-202ENST00000543872 USP6NLQ92738 828 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 CCDC124Q96CT7 223 aaKnown RBP13.33□□□□□ -0.27
SMG8-202ENST00000543872 SENP1Q9P0U3 644 aa13.33□□□□□ -0.27
SMG8-202ENST00000543872 PSMC3IPQ9P2W1 217 aaPredicted RBP13.33□□□□□ -0.27
SMG8-202ENST00000543872 SERPINA10Q9UK55 444 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms