RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 PCDHGA2Q9Y5H1 932 aa20.25■□□□□ 0.83
LTBR-211ENST00000543190 ARNTLO00327 626 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 TARSP26639 723 aaKnown RBP20.24■□□□□ 0.83
LTBR-211ENST00000543190 ARPP19P56211 112 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 CACNB1Q02641 598 aaPredicted RBP20.24■□□□□ 0.83
LTBR-211ENST00000543190 TWF1Q12792 350 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 MCM6Q14566 821 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 KARSQ15046 597 aaKnown RBP20.24■□□□□ 0.83
LTBR-211ENST00000543190 PTPAQ15257 358 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 OVOS1Q6IE37 1185 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 CENPPQ6IPU0 288 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 C1orf228Q6PIY5 440 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 USP37Q86T82 979 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 TMC8Q8IU68 726 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 MFSD6LQ8IWD5 586 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 ST13P5Q8NFI4 369 aaPredicted RBP20.24■□□□□ 0.83
LTBR-211ENST00000543190 MSANTD3Q96H12 275 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 MSTO1Q9BUK6 570 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 PRMT8Q9NR22 394 aaPredicted RBP20.24■□□□□ 0.83
LTBR-211ENST00000543190 MTF2Q9Y483 593 aaPredicted RBP20.24■□□□□ 0.83
LTBR-211ENST00000543190 DNAH14Q0VDD8 3507 aa20.24■□□□□ 0.83
LTBR-211ENST00000543190 LRRN2O75325 713 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 FGF19O95750 216 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 MATR3P43243 847 aaKnown RBP eCLIP20.23■□□□□ 0.83
LTBR-211ENST00000543190 GRIN1Q05586 938 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 FCHO2Q0JRZ9 810 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 SMARCB1Q12824 385 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 C9orf57Q5W0N0 161 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 TPRG1Q6ZUI0 275 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 ZNF720Q7Z2F6 126 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 DNAJC25Q9H1X3 360 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 ZNF334Q9HCZ1 680 aaPredicted RBP20.23■□□□□ 0.83
LTBR-211ENST00000543190 HEBP1Q9NRV9 189 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 DSEQ9UL01 958 aa20.23■□□□□ 0.83
LTBR-211ENST00000543190 OBSL1O75147 1896 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 NRG2O14511 850 aaPredicted RBP20.22■□□□□ 0.83
LTBR-211ENST00000543190 LAMTOR5O43504 91 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 LILRB5O75023 590 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 TBCAO75347 108 aaKnown RBP20.22■□□□□ 0.83
LTBR-211ENST00000543190 ODC1P11926 461 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 UBXN2BQ14CS0 331 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 POSTNQ15063 836 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 JADE1Q6IE81 842 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 VITQ6UXI7 678 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 RUBCNQ92622 972 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 PSMG2Q969U7 264 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 SENP8Q96LD8 212 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 ZSWIM3Q96MP5 696 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 CHRDQ9H2X0 955 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 CRISPLD1Q9H336 500 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 BRD9Q9H8M2 597 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 OLFML3Q9NRN5 406 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 OBP2AQ9NY56 170 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 ZMYM5Q9UJ78 669 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 SRPRBQ9Y5M8 271 aaKnown RBP20.22■□□□□ 0.83
LTBR-211ENST00000543190 R4GN57 208 aa20.22■□□□□ 0.83
LTBR-211ENST00000543190 MTMR11A4FU01 709 aa20.21■□□□□ 0.83
LTBR-211ENST00000543190 EPHB3P54753 998 aa20.21■□□□□ 0.83
LTBR-211ENST00000543190 SPAG1Q07617 926 aa20.21■□□□□ 0.83
LTBR-211ENST00000543190 TMEM132DQ14C87 1099 aa20.21■□□□□ 0.83
LTBR-211ENST00000543190 HS6ST3Q8IZP7 471 aa20.21■□□□□ 0.83
LTBR-211ENST00000543190 KRI1Q8N9T8 703 aaKnown RBP20.21■□□□□ 0.83
LTBR-211ENST00000543190 SHKBP1Q8TBC3 707 aa20.21■□□□□ 0.83
LTBR-211ENST00000543190 C2orf15Q8WU43 125 aaKnown RBP20.21■□□□□ 0.83
LTBR-211ENST00000543190 ZNF638Q14966 1978 aaKnown RBP20.21■□□□□ 0.83
LTBR-211ENST00000543190 PPEF2O14830 753 aa20.2■□□□□ 0.82
LTBR-211ENST00000543190 KINO60870 393 aaKnown RBP20.2■□□□□ 0.82
LTBR-211ENST00000543190 GAP43P17677 238 aa20.2■□□□□ 0.82
LTBR-211ENST00000543190 NMT1P30419 496 aaKnown RBP20.2■□□□□ 0.82
LTBR-211ENST00000543190 ALDH1A3P47895 512 aa20.2■□□□□ 0.82
LTBR-211ENST00000543190 DUSP4Q13115 394 aa20.2■□□□□ 0.82
LTBR-211ENST00000543190 CRELD2Q6UXH1 353 aaPredicted RBP20.2■□□□□ 0.82
LTBR-211ENST00000543190 DSTYKQ6XUX3 929 aa20.2■□□□□ 0.82
LTBR-211ENST00000543190 ZSCAN18Q8TBC5 510 aaPredicted RBP20.2■□□□□ 0.82
LTBR-211ENST00000543190 MKNK1Q9BUB5 465 aa20.2■□□□□ 0.82
LTBR-211ENST00000543190 SPATA6Q9NWH7 488 aaPredicted RBP20.2■□□□□ 0.82
LTBR-211ENST00000543190 ZSCAN32Q9NX65 697 aa20.2■□□□□ 0.82
LTBR-211ENST00000543190 FBXO2Q9UK22 296 aaPredicted RBP20.2■□□□□ 0.82
LTBR-211ENST00000543190 AGO2Q9UKV8 859 aaKnown RBP20.2■□□□□ 0.82
LTBR-211ENST00000543190 TIMM13Q9Y5L4 95 aaPredicted RBP20.2■□□□□ 0.82
LTBR-211ENST00000543190 FRMD3A2A2Y4 597 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 SOBPA7XYQ1 873 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 ANKRD63C9JTQ0 380 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 CHADO15335 359 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 IL18RAPO95256 599 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 KRT18P05783 430 aaKnown RBP20.19■□□□□ 0.82
LTBR-211ENST00000543190 NFICP08651 508 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 TDGF1P13385 188 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 CD72P21854 359 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 ADSSP30520 456 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 TUFMP49411 452 aaKnown RBP20.19■□□□□ 0.82
LTBR-211ENST00000543190 ARMCX5Q6P1M9 558 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 GAREM2Q75VX8 874 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 ITIH5Q86UX2 942 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 DNAJC19Q96DA6 116 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 INTS4Q96HW7 963 aaKnown RBP20.19■□□□□ 0.82
LTBR-211ENST00000543190 EPSTI1Q96J88 318 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 ZCWPW1Q9H0M4 648 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 EPC1Q9H2F5 836 aa20.19■□□□□ 0.82
LTBR-211ENST00000543190 CCDC39Q9UFE4 941 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms