RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 ZNF185O15231 689 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 GHRP10912 638 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 UNGP13051 313 aaPredicted RBP11.76□□□□□ -0.53
SCG3-202ENST00000542355 ZNF132P52740 706 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 PTPN11Q06124 597 aaPredicted RBP11.76□□□□□ -0.53
SCG3-202ENST00000542355 PASD1Q8IV76 773 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 BEST2Q8NFU1 509 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 ZNF606Q8WXB4 792 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.76□□□□□ -0.53
SCG3-202ENST00000542355 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 PADI3Q9ULW8 664 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 SNX12Q9UMY4 172 aa11.76□□□□□ -0.53
SCG3-202ENST00000542355 P4HA1P13674 534 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 ZSCAN20P17040 1043 aaPredicted RBP11.75□□□□□ -0.53
SCG3-202ENST00000542355 CD52P31358 61 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 CXCR5P32302 372 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 DNA2P51530 1060 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 YWHAEP62258 255 aaKnown RBP11.75□□□□□ -0.53
SCG3-202ENST00000542355 MYO1EQ12965 1108 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 PTPROQ16827 1216 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 FBXO47Q5MNV8 452 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 NAA35Q5VZE5 725 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 CAPZA3Q96KX2 299 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 MMS19Q96T76 1030 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 TLR10Q9BXR5 811 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 UNC93B1Q9H1C4 597 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 SMYD3Q9H7B4 428 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 CHST12Q9NRB3 414 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 FAM105AQ9NUU6 356 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
SCG3-202ENST00000542355 COG5Q9UP83 839 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 THSD7BQ9C0I4 1608 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 DYNC1I1O14576 645 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 PPEF2O14830 753 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 ATMINO43313 823 aaPredicted RBP11.75□□□□□ -0.53
SCG3-202ENST00000542355 CYP1A1P04798 512 aaPredicted RBP11.75□□□□□ -0.53
SCG3-202ENST00000542355 TNNC1P63316 161 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 ORC1Q13415 861 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 WHAMMP3Q1A5X7 153 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 ZNF618Q5T7W0 954 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 MEI1Q5TIA1 1274 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 DAAM2Q86T65 1068 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 CEP112Q8N8E3 955 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 LRRC57Q8N9N7 239 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 FAXDC2Q96IV6 333 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 CTTNBP2NLQ9P2B4 639 aa11.75□□□□□ -0.53
SCG3-202ENST00000542355 UBQLN1Q9UMX0 589 aaKnown RBP11.75□□□□□ -0.53
SCG3-202ENST00000542355 NCANO14594 1321 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 MEIS3P2A8K0S8 358 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 KBTBD13C9JR72 458 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 DPYSL4O14531 572 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 TLR3O15455 904 aaKnown RBP11.74□□□□□ -0.53
SCG3-202ENST00000542355 PRLRP16471 622 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 PAK2Q13177 524 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 LPIN1Q14693 890 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 ERCC6LQ2NKX8 1250 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 TRIM71Q2Q1W2 868 aaKnown RBP11.74□□□□□ -0.53
SCG3-202ENST00000542355 XKR4Q5GH76 650 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 RHOT2Q8IXI1 618 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 ZNF653Q96CK0 615 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 ZFP42Q96MM3 310 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 OSBPL9Q96SU4 736 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 ERVK-5Q9HDB9 667 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 PTPN22Q9Y2R2 807 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 SNX9Q9Y5X1 595 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 CEP350Q5VT06 3117 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 BUB1BO60566 1050 aaPredicted RBP11.74□□□□□ -0.53
SCG3-202ENST00000542355 STAU1O95793 577 aaKnown RBP11.74□□□□□ -0.53
SCG3-202ENST00000542355 CKBP12277 381 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 KCNE1P15382 129 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 IBSPP21815 317 aaPredicted RBP11.74□□□□□ -0.53
SCG3-202ENST00000542355 NSFP46459 744 aaKnown RBP11.74□□□□□ -0.53
SCG3-202ENST00000542355 C2CD6Q53TS8 623 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 C9orf57Q5W0N0 161 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 TRIM72Q6ZMU5 477 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 PHLDB2Q86SQ0 1253 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 WHAMMQ8TF30 809 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 COG1Q8WTW3 980 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 TFAP2BQ92481 460 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 UBXN4Q92575 508 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 TWNKQ96RR1 684 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 ZSWIM1Q9BR11 485 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 CYP3A43Q9HB55 503 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 GOLGA2P5Q9HBQ8 144 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 HYOU1Q9Y4L1 999 aa11.74□□□□□ -0.53
SCG3-202ENST00000542355 A0A0U1RQG5 324 aaPredicted RBP11.73□□□□□ -0.53
SCG3-202ENST00000542355 EFCAB8A8MWE9 144 aa11.73□□□□□ -0.53
SCG3-202ENST00000542355 XPOTO43592 962 aaKnown RBP11.73□□□□□ -0.53
SCG3-202ENST00000542355 CD4P01730 458 aa11.73□□□□□ -0.53
SCG3-202ENST00000542355 CYP1A2P05177 515 aa11.73□□□□□ -0.53
SCG3-202ENST00000542355 ITGA4P13612 1032 aa11.73□□□□□ -0.53
SCG3-202ENST00000542355 CD19P15391 556 aa11.73□□□□□ -0.53
SCG3-202ENST00000542355 TCP1P17987 556 aaKnown RBP11.73□□□□□ -0.53
SCG3-202ENST00000542355 RAD23BP54727 409 aa11.73□□□□□ -0.53
SCG3-202ENST00000542355 NOMO3P69849 1222 aa11.73□□□□□ -0.53
SCG3-202ENST00000542355 CENPCQ03188 943 aa11.73□□□□□ -0.53
SCG3-202ENST00000542355 SOX4Q06945 474 aaPredicted RBP11.73□□□□□ -0.53
SCG3-202ENST00000542355 MTFR1Q15390 333 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms