RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 EFTUD2Q15029 972 aaKnown RBP eCLIP16.21■□□□□ 0.192e-6■■■■■ 47
CNOT9-208ENST00000542068 PPP1R21Q6ZMI0 780 aa16.21■□□□□ 0.19
CNOT9-208ENST00000542068 POLR3FQ9H1D9 316 aaPredicted RBP16.21■□□□□ 0.19
CNOT9-208ENST00000542068 SLC5A4Q9NY91 659 aa16.21■□□□□ 0.19
CNOT9-208ENST00000542068 GRID1Q9ULK0 1009 aa16.21■□□□□ 0.19
CNOT9-208ENST00000542068 UBE4BO95155 1302 aa16.21■□□□□ 0.19
CNOT9-208ENST00000542068 GAD2Q05329 585 aa16.21■□□□□ 0.19
CNOT9-208ENST00000542068 SLC1A5Q15758 541 aa16.21■□□□□ 0.19
CNOT9-208ENST00000542068 SMC6Q96SB8 1091 aa16.21■□□□□ 0.19
CNOT9-208ENST00000542068 OSBPL1AQ9BXW6 950 aa16.21■□□□□ 0.19
CNOT9-208ENST00000542068 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
CNOT9-208ENST00000542068 PCDHB4Q9Y5E5 795 aa16.21■□□□□ 0.19
CNOT9-208ENST00000542068 ATAD5Q96QE3 1844 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 A0A0G2JND7 137 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 HMGB2P26583 209 aaKnown RBP16.2■□□□□ 0.18
CNOT9-208ENST00000542068 ZNF772Q68DY9 489 aaPredicted RBP16.2■□□□□ 0.18
CNOT9-208ENST00000542068 SCARA5Q6ZMJ2 495 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 DDX27Q96GQ7 796 aaKnown RBP16.2■□□□□ 0.18
CNOT9-208ENST00000542068 KCND2Q9NZV8 630 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 PRKAG3Q9UGI9 489 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 ZNF862O60290 1169 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 PECAM1P16284 738 aaPredicted RBP16.2■□□□□ 0.18
CNOT9-208ENST00000542068 GMPSP49915 693 aaPredicted RBP16.2■□□□□ 0.18
CNOT9-208ENST00000542068 HSD17B4P51659 736 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 PRKCEQ02156 737 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 TNFAIP1Q13829 316 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 TAF1BQ53T94 588 aaPredicted RBP16.2■□□□□ 0.18
CNOT9-208ENST00000542068 CCDC89Q8N998 374 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 DEPTORQ8TB45 409 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 MORC4Q8TE76 937 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 DDX1Q92499 740 aaKnown RBP16.2■□□□□ 0.18
CNOT9-208ENST00000542068 SLC38A10Q9HBR0 1119 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 KIAA1586Q9HCI6 787 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 TXLNGQ9NUQ3 528 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 GRIN3BO60391 1043 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 SRGAP2CP0DJJ0 459 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 ABL2P42684 1182 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 CCDC60Q8IWA6 550 aaPredicted RBP16.2■□□□□ 0.18
CNOT9-208ENST00000542068 IWS1Q96ST2 819 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 STRA6Q9BX79 667 aa16.2■□□□□ 0.18
CNOT9-208ENST00000542068 LY75O60449 1722 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 C2orf71A6NGG8 1288 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 SGK1O00141 431 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 TLR3O15455 904 aaKnown RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 GM2AP17900 193 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 PDIA2Q13087 525 aaKnown RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 ASRGL1Q7L266 308 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 MTDHQ86UE4 582 aaKnown RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 C12orf50Q8NA57 414 aaPredicted RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 TMEM161BQ8NDZ6 487 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 DTX3LQ8TDB6 740 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 ATP6V0A1Q93050 837 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 RAB3IPQ96QF0 476 aaPredicted RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 TARS2Q9BW92 718 aaKnown RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 TBC1D10AQ9BXI6 508 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 MOV10L1Q9BXT6 1211 aaKnown RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 UBIAD1Q9Y5Z9 338 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 EME2A4GXA9 379 aaPredicted RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 MAPK13O15264 365 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 KRT1P04264 644 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 FDX1P10109 184 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 DSG3P32926 999 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 SLC8A3P57103 927 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 RPL7AP62424 266 aaKnown RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 KRT76Q01546 638 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 SPARCL1Q14515 664 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 CCDC6Q16204 474 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 LVRNQ6Q4G3 990 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 FAM13CQ8NE31 585 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 NAF1Q96HR8 494 aaKnown RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 TMEM121Q9BTD3 319 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 TMEM8AQ9HCN3 771 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 JPH1Q9HDC5 661 aaPredicted RBP16.19■□□□□ 0.18
CNOT9-208ENST00000542068 THSD7AQ9UPZ6 1657 aa16.19■□□□□ 0.18
CNOT9-208ENST00000542068 CFAP69A5D8W1 941 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 VWA5AO00534 786 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 KRT4P19013 534 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 CCND2P30279 289 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 ANGEL2Q5VTE6 544 aaKnown RBP16.18■□□□□ 0.18
CNOT9-208ENST00000542068 SCARA3Q6AZY7 606 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 APBB1IPQ7Z5R6 666 aaPredicted RBP16.18■□□□□ 0.18
CNOT9-208ENST00000542068 USP37Q86T82 979 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 GMLQ99445 158 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 PIM2Q9P1W9 311 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 ADGRA3Q8IWK6 1321 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 K7ERI5 159 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 MTA2O94776 668 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 SSTR1P30872 391 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 CNTN2Q02246 1040 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 STAT4Q14765 748 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 GNPTABQ3T906 1256 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 BRDTQ58F21 947 aaPredicted RBP16.18■□□□□ 0.18
CNOT9-208ENST00000542068 ALDH3A1P30838 453 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 JAK3P52333 1124 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 ZBTB16Q05516 673 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 ZBTB41Q5SVQ8 909 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 RFWD3Q6PCD5 774 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 PPP1R12CQ9BZL4 782 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 KAT6AQ92794 2004 aa16.18■□□□□ 0.18
CNOT9-208ENST00000542068 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms