RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 POU5F1BQ06416 359 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 SP140Q13342 867 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 BIRC3Q13489 604 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 GALEQ14376 348 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 ATXN7L2Q5T6C5 722 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-217ENST00000541578 LAIR1Q6GTX8 287 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 XRRA1Q6P2D8 792 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 KCNV1Q6PIU1 500 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 NPNTQ6UXI9 565 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 LRRC55Q6ZSA7 311 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 SPATA31D4Q6ZUB0 917 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 FBXO18Q8NFZ0 1043 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 STON2Q8WXE9 905 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 HOXB13Q92826 284 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-217ENST00000541578 RGMAQ96B86 450 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 MYEOVQ96EZ4 313 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 CDK5RAP3Q96JB5 506 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 TBCBQ99426 244 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 CGRRF1Q99675 332 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 C7orf25Q9BPX7 421 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 TTPALQ9BTX7 342 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 MLST8Q9BVC4 326 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 NAA15Q9BXJ9 866 aaKnown RBP5.09□□□□□ -1.59
SNHG1-217ENST00000541578 PRDM16Q9HAZ2 1276 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 LANCL2Q9NS86 450 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 MOCS1Q9NZB8 636 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 STXBP5LQ9Y2K9 1186 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 CHST2Q9Y4C5 530 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 CFAP20Q9Y6A4 193 aaKnown RBP5.09□□□□□ -1.59
SNHG1-217ENST00000541578 TSPOAP1O95153 1857 aa5.09□□□□□ -1.6
SNHG1-217ENST00000541578 PBRM1Q86U86 1689 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 hCG_1642624A0A1W2PR95 340 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 A6NNZ2 444 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 FAM171A2A8MVW0 826 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 ZNF185O15231 689 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 FOXN1O15353 648 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 NCR1O76036 304 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 ENDOD1O94919 500 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 NDUFA10O95299 355 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 HLA-DOAP06340 250 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 SERPINB3P29508 390 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 CHN2P52757 468 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 GPSM2P81274 684 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 MGAT2Q10469 447 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 SEMA5AQ13591 1074 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 CNN3Q15417 329 aaKnown RBP5.08□□□□□ -1.6
SNHG1-217ENST00000541578 AFMIDQ63HM1 303 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 TMED8Q6PL24 325 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-217ENST00000541578 Q6ZPA2 131 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 TTC7BQ86TV6 843 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 PLXDC1Q8IUK5 500 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 VRK3Q8IV63 474 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 DRC7Q8IY82 874 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 PRR18Q8N4B5 295 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 POF1BQ8WVV4 589 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 CCT6BQ92526 530 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 CYFIP2Q96F07 1278 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 PHACTR3Q96KR7 559 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 MRI1Q9BV20 369 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 LRRC27Q9C0I9 530 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 SENP6Q9GZR1 1112 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-217ENST00000541578 LDAHQ9H6V9 325 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 CNNM1Q9NRU3 951 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 GNL3LQ9NVN8 582 aaKnown RBP5.08□□□□□ -1.6
SNHG1-217ENST00000541578 HS3ST4Q9Y661 456 aa5.08□□□□□ -1.6
SNHG1-217ENST00000541578 PNPLA7Q6ZV29 1317 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 ABHD14A-ACY1A0A1B0GW23 586 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 DRGXA6NNA5 263 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 SLC16A6O15403 523 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 HTRA2O43464 458 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-217ENST00000541578 NBNO60934 754 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 ALDH2P05091 517 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 RAP2AP10114 183 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 ATP5JP18859 108 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 KRT4P19013 534 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 GUCY1A2P33402 732 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 HALP42357 657 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 RAP2BP61225 183 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 TRIM14Q14142 442 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 SEPT2Q15019 361 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 POLD3Q15054 466 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-217ENST00000541578 PDCD4Q53EL6 469 aaKnown RBP5.07□□□□□ -1.6
SNHG1-217ENST00000541578 FAM102AQ5T9C2 384 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-217ENST00000541578 ERAP2Q6P179 960 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 RSPH3Q86UC2 560 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 SKAP1Q86WV1 359 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 RHOT1Q8IXI2 618 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.07□□□□□ -1.6
SNHG1-217ENST00000541578 KLHDC4Q8TBB5 520 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 EVI5LQ96CN4 794 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 LTV1Q96GA3 475 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-217ENST00000541578 TEX101Q9BY14 249 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 TMEM140Q9NV12 185 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 AJAP1Q9UKB5 411 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-217ENST00000541578 TPCN1Q9ULQ1 816 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 LIMCH1Q9UPQ0 1083 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 POLHQ9Y253 713 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 ATP11BQ9Y2G3 1177 aa5.07□□□□□ -1.6
SNHG1-217ENST00000541578 USP15Q9Y4E8 981 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-217ENST00000541578 NR2E3Q9Y5X4 410 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms