RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 MIS18BP1Q6P0N0 1132 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 TRABD2AQ86V40 505 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 C4orf33Q8N1A6 199 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 CCDC89Q8N998 374 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 DENND1AQ8TEH3 1009 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 POMGNT1Q8WZA1 660 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 AGBL1Q96MI9 1066 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 RAB3IPQ96QF0 476 aaPredicted RBP11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 OSBPL8Q9BZF1 889 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 TXLNGQ9NUQ3 528 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 KLHL11Q9NVR0 708 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 TMX2Q9Y320 296 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 STARD13Q9Y3M8 1113 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 ACTL7BQ9Y614 415 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 UMODL1Q5DID0 1318 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 KIF3CO14782 793 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 PROSCO94903 275 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 ETS1P14921 441 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 ABL2P42684 1182 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 SOX10P56693 466 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 VGLL4Q14135 290 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 FASTKD3Q14CZ7 662 aaKnown RBP11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 SETDB1Q15047 1291 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 TAF11Q15544 211 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 TMEM161BQ8NDZ6 487 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 MICAL1Q8TDZ2 1067 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 CHURC1Q8WUH1 139 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 KIAA1683Q9H0B3 1180 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 ST6GALNAC4Q9H4F1 302 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 TRABDQ9H4I3 376 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 KIAA1586Q9HCI6 787 aa11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 AVENQ9NQS1 362 aaPredicted RBP11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 ZMYND8Q9ULU4 1186 aaPredicted RBP11.15□□□□□ -0.62
PHACTR3-209ENST00000541461 PI4K2BG5E9Z4 385 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 MAGEB2O15479 319 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 SMNDC1O75940 238 aaKnown RBP eCLIP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 ITGBL1O95965 494 aaPredicted RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 T-ENOLP0DO92 83 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 GM2AP17900 193 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 RPA3P35244 121 aaPredicted RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 NPTX2P47972 431 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 CCNHP51946 323 aaPredicted RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 CCNG1P51959 295 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 MOGSQ13724 837 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 TKFCQ3LXA3 575 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 ATP13A4Q4VNC1 1196 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 XKR9Q5GH70 373 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 KAZNQ674X7 775 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 LMBRD2Q68DH5 695 aaPredicted RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 SLC39A4Q6P5W5 647 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 RELL1Q8IUW5 271 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 PASD1Q8IV76 773 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 SCYL3Q8IZE3 742 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 ZCCHC9Q8N567 271 aaKnown RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 BBOF1Q8ND07 529 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 LRRC37BQ96QE4 947 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 LRMDAQ9H2I8 198 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 AGO4Q9HCK5 861 aaKnown RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 USH1CQ9Y6N9 552 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 CENPFP49454 3210 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 OTOFQ9HC10 1997 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 DOCK1Q14185 1865 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 DENND3A2RUS2 1198 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 WFS1O76024 890 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 CBX6O95503 412 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 KRT10P13645 584 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 PTPRAP18433 802 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 KRT15P19012 456 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 GNAZP19086 355 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 NSFP46459 744 aaKnown RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 IREB2P48200 963 aaKnown RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 YARSP54577 528 aaKnown RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 MCCD1P59942 119 aaPredicted RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 SNRPFP62306 86 aaKnown RBP11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 CYP24A1Q07973 514 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 MTMR2Q13614 643 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 SLC1A5Q15758 541 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 PARP6Q2NL67 630 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 TRIM68Q6AZZ1 485 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 LONP2Q86WA8 852 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 FAM13CQ8NE31 585 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 MFSD14AQ96MC6 490 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 IWS1Q96ST2 819 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 C11orf70Q9BRQ4 267 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 ELP3Q9H9T3 547 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 EXOC7Q9UPT5 735 aa11.14□□□□□ -0.63
PHACTR3-209ENST00000541461 A0A1W2PPM1 405 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 NFIBO00712 420 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 PEX11AO75192 247 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 UPP2O95045 317 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 CELF2O95319 508 aaKnown RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 DSG3P32926 999 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 MRPS9P82933 396 aaKnown RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 SPARCL1Q14515 664 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 NAIF1Q69YI7 327 aaPredicted RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 CAPRIN2Q6IMN6 1127 aaKnown RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 MON1BQ7L1V2 547 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms