RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 LRPAP1P30533 357 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 HMGN5P82970 282 aaKnown RBP13.34□□□□□ -0.27
SNHG1-216ENST00000541416 AMPD2Q01433 879 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 PPP2R3AQ06190 1150 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 DMWDQ09019 674 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 DUSP4Q13115 394 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 GAS6Q14393 721 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 ECM1Q16610 540 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 SLC10A6Q3KNW5 377 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 TAS1R3Q7RTX0 852 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 WDR5BQ86VZ2 330 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 KCTD17Q8N5Z5 321 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 FAM160A2Q8N612 972 aaPredicted RBP13.34□□□□□ -0.27
SNHG1-216ENST00000541416 IGSF22Q8N9C0 903 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 SPIRE2Q8WWL2 714 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 PSMG2Q969U7 264 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 KIF12Q96FN5 646 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 BICD1Q96G01 975 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 PGLYRP2Q96PD5 576 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 LLPHQ9BRT6 129 aaKnown RBP13.34□□□□□ -0.27
SNHG1-216ENST00000541416 ATXN3LQ9H3M9 355 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 HSFX1Q9UBD0 423 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 TUBGCP4Q9UGJ1 667 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 ANGPTL2Q9UKU9 493 aa13.34□□□□□ -0.27
SNHG1-216ENST00000541416 CCDC163A0A0D9SF12 145 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 E9PMD0 336 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 K7ESF4 209 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 NRG2O14511 850 aaPredicted RBP13.33□□□□□ -0.28
SNHG1-216ENST00000541416 ODC1P11926 461 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 PLS3P13797 630 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 TYMPP19971 482 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 SCP2P22307 547 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 GUCY2CP25092 1073 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 TUFMP49411 452 aaKnown RBP13.33□□□□□ -0.28
SNHG1-216ENST00000541416 LIMK1P53667 647 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 MCL1Q07820 350 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 TAF12Q16514 161 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 ITPRIPL2Q3MIP1 535 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 GPR158Q5T848 1215 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 OVOS1Q6IE37 1185 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 RINT1Q6NUQ1 792 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 DTHD1Q6ZMT9 781 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 TMC8Q8IU68 726 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 DAW1Q8N136 415 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 FBXO18Q8NFZ0 1043 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 BPIFB1Q8TDL5 484 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 RBM12Q9NTZ6 932 aaKnown RBP13.33□□□□□ -0.28
SNHG1-216ENST00000541416 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 LARSQ9P2J5 1176 aaKnown RBP13.33□□□□□ -0.28
SNHG1-216ENST00000541416 CFAP47Q6ZTR5 3102 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 LAMA1P25391 3075 aa13.33□□□□□ -0.28
SNHG1-216ENST00000541416 ABLIM1O14639 778 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 CCDC192P0DO97 292 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 CXCL8P10145 99 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 GABRR2P28476 465 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 WEE1P30291 646 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 CDC25CP30307 473 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 SOX9P48436 509 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 CCINQ13939 588 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 PON2Q15165 354 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 CENPPQ6IPU0 288 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 Q6ZS52 159 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 C1orf186Q6ZWK4 172 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 CACNA2D4Q7Z3S7 1137 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 DNAJB7Q7Z6W7 309 aaPredicted RBP13.32□□□□□ -0.28
SNHG1-216ENST00000541416 TMEM161BQ8NDZ6 487 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 GAB3Q8WWW8 586 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 CDK5RAP3Q96JB5 506 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 ZBTB45Q96K62 511 aaPredicted RBP13.32□□□□□ -0.28
SNHG1-216ENST00000541416 RUSC1Q9BVN2 902 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 LRRC3Q9BY71 257 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 DSEQ9UL01 958 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 LIMCH1Q9UPQ0 1083 aa13.32□□□□□ -0.28
SNHG1-216ENST00000541416 TIMM13Q9Y5L4 95 aaPredicted RBP13.32□□□□□ -0.28
SNHG1-216ENST00000541416 NUP210Q8TEM1 1887 aaPredicted RBP13.31□□□□□ -0.28
SNHG1-216ENST00000541416 TTC26A0AVF1 554 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 SFI1A8K8P3 1242 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 GDF9O60383 454 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 RPP40O75818 363 aaKnown RBP13.31□□□□□ -0.28
SNHG1-216ENST00000541416 AKAP3O75969 853 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 OR4Q2P0C623 313 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 MAPTP10636 758 aaKnown RBP13.31□□□□□ -0.28
SNHG1-216ENST00000541416 PRPHP41219 470 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 AARSP49588 968 aaKnown RBP eCLIP13.31□□□□□ -0.285e-21■□□□□ 9.8
SNHG1-216ENST00000541416 MCM2P49736 904 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 LIG4P49917 911 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 SMARCB1Q12824 385 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 GRSF1Q12849 480 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNHG1-216ENST00000541416 SRSF5Q13243 272 aaKnown RBP13.31□□□□□ -0.28
SNHG1-216ENST00000541416 ZRSR1Q15695 479 aaKnown RBP13.31□□□□□ -0.28
SNHG1-216ENST00000541416 SEZ6Q53EL9 994 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 TXNDC11Q6PKC3 985 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 CD302Q8IX05 232 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 C4orf32Q8N8J7 132 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 RSPRY1Q96DX4 576 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 TMEM209Q96SK2 561 aa13.31□□□□□ -0.28
SNHG1-216ENST00000541416 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms