RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 DNAJC25Q9H1X3 360 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 ANKFY1Q9P2R3 1169 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 HSFX1Q9UBD0 423 aa29.19■■■□□ 2.26
CHFR-218ENST00000540963 CLDN3O15551 220 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 CLTAP09496 248 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 WEE1P30291 646 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 CTHP32929 405 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 HMGN5P82970 282 aaKnown RBP29.18■■■□□ 2.26
CHFR-218ENST00000540963 MYBPC2Q14324 1141 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 ZBTB6Q15916 424 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 HAUS6Q7Z4H7 955 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 USP37Q86T82 979 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 ARID3BQ8IVW6 561 aaPredicted RBP29.18■■■□□ 2.26
CHFR-218ENST00000540963 TMEM161BQ8NDZ6 487 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 UBQLN1Q9UMX0 589 aaKnown RBP29.18■■■□□ 2.26
CHFR-218ENST00000540963 LIMCH1Q9UPQ0 1083 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 GREB1Q4ZG55 1949 aa29.18■■■□□ 2.26
CHFR-218ENST00000540963 MAP1BP46821 2468 aaKnown RBP29.17■■■□□ 2.26
CHFR-218ENST00000540963 TTC26A0AVF1 554 aa29.17■■■□□ 2.26
CHFR-218ENST00000540963 SLC38A8A6NNN8 435 aa29.17■■■□□ 2.26
CHFR-218ENST00000540963 SPECC1L-ADORA2AF8WAN1 911 aa29.17■■■□□ 2.26
CHFR-218ENST00000540963 XPOTO43592 962 aaKnown RBP29.17■■■□□ 2.26
CHFR-218ENST00000540963 PAX3P23760 479 aa29.17■■■□□ 2.26
CHFR-218ENST00000540963 PRPHP41219 470 aa29.17■■■□□ 2.26
CHFR-218ENST00000540963 DUSP4Q13115 394 aa29.17■■■□□ 2.26
CHFR-218ENST00000540963 KYAT1Q16773 422 aa29.17■■■□□ 2.26
CHFR-218ENST00000540963 PLS3P13797 630 aa29.16■■■□□ 2.26
CHFR-218ENST00000540963 TYMPP19971 482 aa29.16■■■□□ 2.26
CHFR-218ENST00000540963 U2AF2P26368 475 aaKnown RBP eCLIP29.16■■■□□ 2.264e-6■□□□□ 8.6
CHFR-218ENST00000540963 DMWDQ09019 674 aa29.16■■■□□ 2.26
CHFR-218ENST00000540963 CENPPQ6IPU0 288 aa29.16■■■□□ 2.26
CHFR-218ENST00000540963 FAM200AQ8TCP9 573 aa29.16■■■□□ 2.26
CHFR-218ENST00000540963 KCNN1Q92952 543 aa29.16■■■□□ 2.26
CHFR-218ENST00000540963 PSMG2Q969U7 264 aa29.16■■■□□ 2.26
CHFR-218ENST00000540963 MKNK1Q9BUB5 465 aa29.16■■■□□ 2.26
CHFR-218ENST00000540963 RBM12Q9NTZ6 932 aaKnown RBP29.16■■■□□ 2.26
CHFR-218ENST00000540963 SPAG17Q6Q759 2223 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 DPYSL4O14531 572 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 CXCL8P10145 99 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 MAPTP10636 758 aaKnown RBP29.15■■■□□ 2.26
CHFR-218ENST00000540963 PLCB2Q00722 1185 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 CCINQ13939 588 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 ST3GAL2Q16842 350 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 SEZ6Q53EL9 994 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 ITIH5Q86UX2 942 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 WDR5BQ86VZ2 330 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 PGLYRP2Q96PD5 576 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 CRISPLD1Q9H336 500 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 KCND2Q9NZV8 630 aa29.15■■■□□ 2.26
CHFR-218ENST00000540963 SFI1A8K8P3 1242 aa29.14■■■□□ 2.26
CHFR-218ENST00000540963 H0YCG3 227 aa29.14■■■□□ 2.26
CHFR-218ENST00000540963 LIMK1P53667 647 aa29.14■■■□□ 2.26
CHFR-218ENST00000540963 NBR1Q14596 966 aa29.14■■■□□ 2.26
CHFR-218ENST00000540963 WDR44Q5JSH3 913 aa29.14■■■□□ 2.26
CHFR-218ENST00000540963 TXNDC11Q6PKC3 985 aa29.14■■■□□ 2.26
CHFR-218ENST00000540963 Q6ZS52 159 aa29.14■■■□□ 2.26
CHFR-218ENST00000540963 GAREM2Q75VX8 874 aa29.14■■■□□ 2.26
CHFR-218ENST00000540963 DNAJB7Q7Z6W7 309 aaPredicted RBP29.14■■■□□ 2.26
CHFR-218ENST00000540963 KIF12Q96FN5 646 aa29.14■■■□□ 2.26
CHFR-218ENST00000540963 TIMM13Q9Y5L4 95 aaPredicted RBP29.14■■■□□ 2.26
CHFR-218ENST00000540963 CHD8Q9HCK8 2581 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 OR4Q2P0C623 313 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 SOX9P48436 509 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 TOB1P50616 345 aaPredicted RBP29.13■■■□□ 2.25
CHFR-218ENST00000540963 PPP2R3AQ06190 1150 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 ARHGAP15Q53QZ3 475 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 HYIQ5T013 277 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 OVOS1Q6IE37 1185 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 DSTYKQ6XUX3 929 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 CEP68Q76N32 757 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 KCNK18Q7Z418 384 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 CCDC83Q8IWF9 413 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 FAM160A2Q8N612 972 aaPredicted RBP29.13■■■□□ 2.25
CHFR-218ENST00000540963 LOXL4Q96JB6 756 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 MMTAG2Q9BU76 263 aaKnown RBP29.13■■■□□ 2.25
CHFR-218ENST00000540963 ZMYM5Q9UJ78 669 aa29.13■■■□□ 2.25
CHFR-218ENST00000540963 CCDC163A0A0D9SF12 145 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 MTMR11A4FU01 709 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 PP2D1A8MPX8 630 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 SCP2P22307 547 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 SRSF5Q13243 272 aaKnown RBP29.12■■■□□ 2.25
CHFR-218ENST00000540963 STXBP5Q5T5C0 1151 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 DTHD1Q6ZMT9 781 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 SYT2Q8N9I0 419 aaPredicted RBP29.12■■■□□ 2.25
CHFR-218ENST00000540963 LRRC3BQ96PB8 259 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 ATXN3LQ9H3M9 355 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 GTSE1Q9NYZ3 720 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 PCDHB6Q9Y5E3 794 aa29.12■■■□□ 2.25
CHFR-218ENST00000540963 KIF26AQ9ULI4 1882 aaPredicted RBP29.11■■■□□ 2.25
CHFR-218ENST00000540963 ADRB2P07550 413 aa29.11■■■□□ 2.25
CHFR-218ENST00000540963 MATR3P43243 847 aaKnown RBP eCLIP29.11■■■□□ 2.25
CHFR-218ENST00000540963 PTPAQ15257 358 aa29.11■■■□□ 2.25
CHFR-218ENST00000540963 HEATR6Q6AI08 1181 aaKnown RBP29.11■■■□□ 2.25
CHFR-218ENST00000540963 ARMCX5Q6P1M9 558 aa29.11■■■□□ 2.25
CHFR-218ENST00000540963 FAM184AQ8NB25 1140 aa29.11■■■□□ 2.25
CHFR-218ENST00000540963 BPIFB1Q8TDL5 484 aa29.11■■■□□ 2.25
CHFR-218ENST00000540963 HAPLN2Q9GZV7 340 aa29.11■■■□□ 2.25
CHFR-218ENST00000540963 LARSQ9P2J5 1176 aaKnown RBP29.11■■■□□ 2.25
CHFR-218ENST00000540963 SLC27A5Q9Y2P5 690 aa29.11■■■□□ 2.25
CHFR-218ENST00000540963 CNOT1A5YKK6 2376 aaKnown RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms