RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 WNT10BO00744 389 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 HGSO14964 777 aaPredicted RBP13.01□□□□□ -0.33
NPC1-202ENST00000540608 SPAG7O75391 227 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 SSR1P43307 286 aaKnown RBP13.01□□□□□ -0.33
NPC1-202ENST00000540608 BAG6P46379 1132 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 RTP1P59025 263 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 ERICH1Q86X53 443 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 TTLL6Q8N841 843 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 FEZF2Q8TBJ5 459 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 BICD1Q96G01 975 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 RMDN3Q96TC7 470 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 PDCD2LQ9BRP1 358 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 PDGFDQ9GZP0 370 aaPredicted RBP13.01□□□□□ -0.33
NPC1-202ENST00000540608 TRABDQ9H4I3 376 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 SLC38A10Q9HBR0 1119 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 SENP1Q9P0U3 644 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 SMG5Q9UPR3 1016 aaKnown RBP13.01□□□□□ -0.33
NPC1-202ENST00000540608 STBD1O95210 358 aa13□□□□□ -0.33
NPC1-202ENST00000540608 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
NPC1-202ENST00000540608 DNAJC3Q13217 504 aa13□□□□□ -0.33
NPC1-202ENST00000540608 MOGSQ13724 837 aa13□□□□□ -0.33
NPC1-202ENST00000540608 EAPPQ56P03 285 aaPredicted RBP13□□□□□ -0.33
NPC1-202ENST00000540608 TDRD10Q5VZ19 366 aaKnown RBP13□□□□□ -0.33
NPC1-202ENST00000540608 PPP1R2P3Q6NXS1 205 aa13□□□□□ -0.33
NPC1-202ENST00000540608 TAS1R3Q7RTX0 852 aa13□□□□□ -0.33
NPC1-202ENST00000540608 PASD1Q8IV76 773 aa13□□□□□ -0.33
NPC1-202ENST00000540608 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
NPC1-202ENST00000540608 UTP4Q969X6 686 aaKnown RBP13□□□□□ -0.33
NPC1-202ENST00000540608 FNBP1Q96RU3 617 aa13□□□□□ -0.33
NPC1-202ENST00000540608 FHDC1Q9C0D6 1143 aaPredicted RBP13□□□□□ -0.33
NPC1-202ENST00000540608 LRMDAQ9H2I8 198 aa13□□□□□ -0.33
NPC1-202ENST00000540608 PXMP2Q9NR77 195 aa13□□□□□ -0.33
NPC1-202ENST00000540608 PARVAQ9NVD7 372 aa13□□□□□ -0.33
NPC1-202ENST00000540608 IP6K2Q9UHH9 426 aa13□□□□□ -0.33
NPC1-202ENST00000540608 DNPEPQ9ULA0 475 aa13□□□□□ -0.33
NPC1-202ENST00000540608 DRG1Q9Y295 367 aaKnown RBP13□□□□□ -0.33
NPC1-202ENST00000540608 TESPA1A2RU30 521 aaPredicted RBP13□□□□□ -0.33
NPC1-202ENST00000540608 WDR46O15213 610 aaKnown RBP13□□□□□ -0.33
NPC1-202ENST00000540608 TJP3O95049 919 aa13□□□□□ -0.33
NPC1-202ENST00000540608 ATP2A2P16615 1042 aaKnown RBP13□□□□□ -0.33
NPC1-202ENST00000540608 TNNI1P19237 187 aa13□□□□□ -0.33
NPC1-202ENST00000540608 GJC1P36383 396 aa13□□□□□ -0.33
NPC1-202ENST00000540608 PIK3CAP42336 1068 aa13□□□□□ -0.33
NPC1-202ENST00000540608 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
NPC1-202ENST00000540608 CUL2Q13617 745 aa13□□□□□ -0.33
NPC1-202ENST00000540608 PDK4Q16654 411 aa13□□□□□ -0.33
NPC1-202ENST00000540608 LMBRD2Q68DH5 695 aaPredicted RBP13□□□□□ -0.33
NPC1-202ENST00000540608 SPOPLQ6IQ16 392 aa13□□□□□ -0.33
NPC1-202ENST00000540608 VSIG1Q86XK7 387 aa13□□□□□ -0.33
NPC1-202ENST00000540608 ALLCQ8N6M5 410 aa13□□□□□ -0.33
NPC1-202ENST00000540608 GLIS1Q8NBF1 620 aa13□□□□□ -0.33
NPC1-202ENST00000540608 MTMR14Q8NCE2 650 aa13□□□□□ -0.33
NPC1-202ENST00000540608 MCPH1Q8NEM0 835 aa13□□□□□ -0.33
NPC1-202ENST00000540608 RBM41Q96IZ5 413 aaKnown RBP13□□□□□ -0.33
NPC1-202ENST00000540608 ZNF570Q96NI8 536 aa13□□□□□ -0.33
NPC1-202ENST00000540608 LRRC37BQ96QE4 947 aa13□□□□□ -0.33
NPC1-202ENST00000540608 SMC6Q96SB8 1091 aa13□□□□□ -0.33
NPC1-202ENST00000540608 SLC5A4Q9NY91 659 aa13□□□□□ -0.33
NPC1-202ENST00000540608 GABBR1Q9UBS5 961 aa13□□□□□ -0.33
NPC1-202ENST00000540608 ZNF148Q9UQR1 794 aa13□□□□□ -0.33
NPC1-202ENST00000540608 PCDHB4Q9Y5E5 795 aa13□□□□□ -0.33
NPC1-202ENST00000540608 DYNC1LI1Q9Y6G9 523 aaKnown RBP13□□□□□ -0.33
NPC1-202ENST00000540608 POC1B-GALNT4F8VUJ3 575 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ALOX15BO15296 676 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ZNF862O60290 1169 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 DGAT1O75907 488 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 KRT10P13645 584 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 GNA15P30679 374 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ARSEP51690 589 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 MORF4L2Q15014 288 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 PKN2Q16513 984 aaKnown RBP12.99□□□□□ -0.33
NPC1-202ENST00000540608 NLRX1Q86UT6 975 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 KIRREL3Q8IZU9 778 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 AGGF1Q8N302 714 aaeCLIP12.99□□□□□ -0.33
NPC1-202ENST00000540608 ZBED3Q96IU2 234 aaPredicted RBP12.99□□□□□ -0.33
NPC1-202ENST00000540608 SLITRK1Q96PX8 696 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 TMEM237Q96Q45 408 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 PPCSQ9HAB8 311 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ARHGAP28Q9P2N2 729 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 CNTN6Q9UQ52 1028 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 CHKBQ9Y259 395 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 H0YCG3 227 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 DKC1O60832 514 aaKnown RBP eCLIP12.99□□□□□ -0.33
NPC1-202ENST00000540608 EDF1O60869 148 aaKnown RBP12.99□□□□□ -0.33
NPC1-202ENST00000540608 DCTN3O75935 186 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 VNN1O95497 513 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ZSCAN5DPP0CG00 497 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 PECAM1P16284 738 aaPredicted RBP12.99□□□□□ -0.33
NPC1-202ENST00000540608 KRT15P19012 456 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ALDH3A1P30838 453 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ABCD1P33897 745 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 RASA2Q15283 850 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ATP13A4Q4VNC1 1196 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ARHGEF16Q5VV41 709 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 KAZNQ674X7 775 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 TMEM270Q6UE05 265 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 LPAR1Q92633 364 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 ERP27Q96DN0 273 aa12.99□□□□□ -0.33
NPC1-202ENST00000540608 APOBEC3GQ9HC16 384 aaKnown RBP12.99□□□□□ -0.33
NPC1-202ENST00000540608 GRID1Q9ULK0 1009 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms