RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 TFDP1Q14186 410 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 TEDDM1Q5T9Z0 273 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 TMPRSS6Q8IU80 811 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 RBM46Q8TBY0 533 aaKnown RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 ZNF75CPQ92670 426 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 CCDC124Q96CT7 223 aaKnown RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 PAFAH2Q99487 392 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 KIAA1683Q9H0B3 1180 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 AGO2Q9UKV8 859 aaKnown RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 SHOC2Q9UQ13 582 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 CHMP2BQ9UQN3 213 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 ASTN1O14525 1302 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 ADGRA3Q8IWK6 1321 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 DNALI1O14645 258 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 CBX6O95503 412 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 MCF2P10911 925 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 MYL2P10916 166 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 SERPINB3P29508 390 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 ARL4AP40617 200 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 CASP5P51878 434 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 BLMHQ13867 455 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 COG2Q14746 738 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 TRIP10Q15642 601 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 AADACL2Q6P093 401 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 SCARA5Q6ZMJ2 495 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 EXOC8Q8IYI6 725 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 FAM111AQ96PZ2 611 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 TBC1D10AQ9BXI6 508 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 DBNDD1Q9H9R9 158 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 RBAKQ9NYW8 714 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 DCCP43146 1447 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 ARL1P40616 181 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 RFC5P40937 340 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 CPA2P48052 419 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 CACNB3P54284 484 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 ACVR2BQ13705 512 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 ZNF394Q53GI3 561 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 FAM47CQ5HY64 1035 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 IZUMO2Q6UXV1 221 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 CDKL3Q8IVW4 592 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 MCEEQ96PE7 176 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 TAS2R14Q9NYV8 317 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 IFRD2Q12894 506 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-203ENST00000540357 RASA2Q15283 850 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 LRRC36Q1X8D7 754 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 CBWD6Q4V339 395 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 CBWD3Q5JTY5 395 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 CBWD5Q5RIA9 395 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 RC3H1Q5TC82 1133 aaKnown RBP13.66□□□□□ -0.22
DNMT1-203ENST00000540357 EP400NLQ6ZTU2 488 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 UPF3AQ9H1J1 476 aaKnown RBP13.66□□□□□ -0.22
DNMT1-203ENST00000540357 CCDC68Q9H2F9 335 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ZC3H7BQ9UGR2 993 aaKnown RBP13.66□□□□□ -0.22
DNMT1-203ENST00000540357 PCSK1NQ9UHG2 260 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 C2CD2Q9Y426 696 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 TNS2Q63HR2 1409 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 CYP1A2P05177 515 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 STX1BP61266 288 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ARHGAP22Q7Z5H3 698 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ARHGEF19Q8IW93 802 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 APOL6Q9BWW8 343 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 PSMG1O95456 288 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ZCCHC18P0CG32 403 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ALADP13716 330 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 RPS6KA2Q15349 733 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 HHIPL2Q6UWX4 724 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ZNF184Q99676 751 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-203ENST00000540357 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-203ENST00000540357 KRT3P12035 628 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 PDK4Q16654 411 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ZNF699Q32M78 642 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ZBTB33Q86T24 672 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ARID3BQ8IVW6 561 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-203ENST00000540357 TBC1D16Q8TBP0 767 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 TMC2Q8TDI7 906 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
DNMT1-203ENST00000540357 SLC5A5Q92911 643 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 CCDC134Q9H6E4 229 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 WDR35Q9P2L0 1181 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
DNMT1-203ENST00000540357 BCL9O00512 1426 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 CYP3A7-CYP3A51PA0A087WV96 503 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 ATP5BP06576 529 aaKnown RBP13.65□□□□□ -0.22
DNMT1-203ENST00000540357 HSPA8P11142 646 aaKnown RBP13.65□□□□□ -0.22
DNMT1-203ENST00000540357 CYP3A7P24462 503 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 CHI3L2Q15782 390 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 FBXO36Q8NEA4 188 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 APBB2Q92870 758 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 UNC45AQ9H3U1 944 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 EBF2Q9HAK2 575 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 AS3MTQ9HBK9 375 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 BAZ2BQ9UIF8 2168 aaKnown RBP13.65□□□□□ -0.22
DNMT1-203ENST00000540357 SAT1P21673 171 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 ZNF667Q5HYK9 610 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 CNKSR1Q969H4 720 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 MXRA8Q9BRK3 442 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 TRIM15Q9C019 465 aa13.65□□□□□ -0.22
DNMT1-203ENST00000540357 ERVK-5Q9HDB9 667 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms