RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 NT5C2P49902 561 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 CYLC2Q14093 348 aaPredicted RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 PARP6Q2NL67 630 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 FAM13CQ8NE31 585 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 UCMAQ8WVF2 138 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 NMD3Q96D46 503 aaKnown RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 MAML3Q96JK9 1138 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 DDX50Q9BQ39 737 aaKnown RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 NDE1Q9NXR1 346 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 PCDHB13Q9Y5F0 798 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 CES2O00748 559 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 HNRNPCL1O60812 293 aaKnown RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 CCDC22O60826 627 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 TBCAO75347 108 aaKnown RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 ETS2P15036 469 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 NR2F2P24468 414 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 MAP3K10Q02779 954 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 PDE1CQ14123 709 aaPredicted RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 EXOC3L4Q17RC7 722 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 HABP4Q5JVS0 413 aaKnown RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 LRRC74BQ6ZQY2 392 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 KIAA0895Q8NCT3 520 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 TTC8Q8TAM2 541 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 MYLK2Q9H1R3 596 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 CTNNAL1Q9UBT7 734 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 DCTN4Q9UJW0 460 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 LAMB2P55268 1798 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 HAUS5O94927 633 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 TDP2O95551 362 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 GAS8O95995 478 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 CA4P22748 312 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 POLGP54098 1239 aaPredicted RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 OAZ1P54368 228 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 DNAJC3Q13217 504 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 CENPPQ6IPU0 288 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 SYT2Q8N9I0 419 aaPredicted RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 ASAP3Q8TDY4 903 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 WDR11Q9BZH6 1224 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 COLQQ9Y215 455 aaPredicted RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 DIS3Q9Y2L1 958 aaKnown RBP9.18□□□□□ -0.94
DDB1-217ENST00000540166 COMMD3-BMI1R4GMX3 469 aa9.18□□□□□ -0.94
DDB1-217ENST00000540166 A0A0G2JND7 137 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 COQ9O75208 318 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 TJP3O95049 919 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 NUDT17P0C025 328 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 USP46P62068 366 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 SLC34A1Q06495 639 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 BFSP2Q13515 415 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 MIIPQ5JXC2 388 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 SPDYCQ5MJ68 293 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 MFSD4BQ5TF39 518 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 DAB2IPQ5VWQ8 1189 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 GSTA5Q7RTV2 222 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 INPP5DQ92835 1189 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 CATSPER2Q96P56 530 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 SLC28A3Q9HAS3 691 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 TYW1Q9NV66 732 aaKnown RBP9.17□□□□□ -0.94
DDB1-217ENST00000540166 PCMTD2Q9NV79 361 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 DDX25Q9UHL0 483 aaKnown RBP9.17□□□□□ -0.94
DDB1-217ENST00000540166 ABCB11O95342 1321 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 ARHGAP42A6NI28 874 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 POC1B-GALNT4F8VUJ3 575 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 CHRNA3P32297 505 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 ADCY8P40145 1251 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 MED21Q13503 144 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 LLGL1Q15334 1064 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 TTBK2Q6IQ55 1244 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 KLC3Q6P597 504 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 TLK2Q86UE8 772 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 RASSF3Q86WH2 238 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 WDR60Q8WVS4 1066 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 SYN2Q92777 582 aaPredicted RBP9.17□□□□□ -0.94
DDB1-217ENST00000540166 SYNCQ9H7C4 482 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 CBX6O95503 412 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 RPL13P26373 211 aaKnown RBP9.17□□□□□ -0.94
DDB1-217ENST00000540166 PPIGQ13427 754 aaKnown RBP eCLIP9.17□□□□□ -0.942e-6■■■□□ 18.5
DDB1-217ENST00000540166 FSCN1Q16658 493 aaKnown RBP9.17□□□□□ -0.94
DDB1-217ENST00000540166 CXCL17Q6UXB2 119 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 C4orf32Q8N8J7 132 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 NPLOC4Q8TAT6 608 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 DIS3LQ8TF46 1054 aaKnown RBP9.17□□□□□ -0.94
DDB1-217ENST00000540166 PRPF31Q8WWY3 499 aaKnown RBP9.17□□□□□ -0.94
DDB1-217ENST00000540166 MPP4Q96JB8 637 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 ZNF184Q99676 751 aaPredicted RBP9.17□□□□□ -0.94
DDB1-217ENST00000540166 AIPL1Q9NZN9 384 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 SUCLA2Q9P2R7 463 aaPredicted RBP9.17□□□□□ -0.94
DDB1-217ENST00000540166 SIK3Q9Y2K2 1263 aa9.17□□□□□ -0.94
DDB1-217ENST00000540166 TPD52L2O43399 206 aaKnown RBP9.16□□□□□ -0.94
DDB1-217ENST00000540166 PTPN4P29074 926 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 CCND2P30279 289 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 TUBP50607 506 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 AP2B1P63010 937 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 GABPAQ06546 454 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 KCNH2Q12809 1159 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 COASYQ13057 564 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 UBE2SQ16763 222 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 RNF43Q68DV7 783 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 CCDC137Q6PK04 289 aaKnown RBP9.16□□□□□ -0.94
DDB1-217ENST00000540166 DEFB128Q7Z7B8 93 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 FBXO16Q8IX29 292 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms