RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 H3BQ06 376 aaPredicted RBP23.75■■□□□ 1.39
TRIM65-202ENST00000540128 TGM5O43548 720 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 PAPLNO95428 1278 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 ATICP31939 592 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 OR1D2P34982 312 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 CTXN3Q4LDR2 81 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 CT47A1Q5JQC4 288 aaPredicted RBP23.75■■□□□ 1.39
TRIM65-202ENST00000540128 ZNF280DQ6N043 979 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 SV2AQ7L0J3 742 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 PALB2Q86YC2 1186 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.75■■□□□ 1.394e-7■■■■■ 73.7
TRIM65-202ENST00000540128 SPATA18Q8TC71 538 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 MED15Q96RN5 788 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 S1PR5Q9H228 398 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 DPP7Q9UHL4 492 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 CD207Q9UJ71 328 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 CDY1Q9Y6F8 540 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 REV3LO60673 3130 aa23.75■■□□□ 1.39
TRIM65-202ENST00000540128 VNN1O95497 513 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 FAM163BP0C2L3 166 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 ERCC5P28715 1186 aaPredicted RBP23.74■■□□□ 1.39
TRIM65-202ENST00000540128 STX17P56962 302 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 PPP3CAQ08209 521 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 TRPC3Q13507 836 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 PUS10Q3MIT2 529 aaKnown RBP23.74■■□□□ 1.39
TRIM65-202ENST00000540128 DPCR1Q3MIW9 517 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 CCDC183Q5T5S1 534 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 WSCD1Q658N2 575 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 OVOS1Q6IE37 1185 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 DPH6Q7L8W6 267 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 FRMD5Q7Z6J6 570 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 TOP6BLQ8N6T0 577 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.74■■□□□ 1.39
TRIM65-202ENST00000540128 ZNF461Q8TAF7 563 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 ASB2Q96Q27 587 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 XYLT2Q9H1B5 865 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 PLEKHA4Q9H4M7 779 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 VRTNQ9H8Y1 702 aa23.74■■□□□ 1.39
TRIM65-202ENST00000540128 METTL14Q9HCE5 456 aaKnown RBP23.74■■□□□ 1.39
TRIM65-202ENST00000540128 PRUNE2Q8WUY3 3088 aa23.73■■□□□ 1.39
TRIM65-202ENST00000540128 OR6C75A6NL08 312 aa23.73■■□□□ 1.39
TRIM65-202ENST00000540128 PHACTR2O75167 634 aa23.73■■□□□ 1.39
TRIM65-202ENST00000540128 ABLIM3O94929 683 aa23.73■■□□□ 1.39
TRIM65-202ENST00000540128 MYL6P60660 151 aa23.73■■□□□ 1.39
TRIM65-202ENST00000540128 SMRP1Q8NCR6 262 aa23.73■■□□□ 1.39
TRIM65-202ENST00000540128 ARMCX3Q9UH62 379 aaPredicted RBP23.73■■□□□ 1.39
TRIM65-202ENST00000540128 STX10O60499 249 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 HUS1O60921 280 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 GNA14O95837 355 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 TRIM49P0CI25 452 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 TRIM49CP0CI26 452 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 PTMSP20962 102 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 ROR1Q01973 937 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 BIRC3Q13489 604 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 NCOA4Q13772 614 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 SOWAHAQ2M3V2 549 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 RTL10Q7L3V2 364 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 METTL23Q86XA0 190 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 GLYCTKQ8IVS8 523 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 TMEM86AQ8N2M4 240 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 PDCL2Q8N4E4 241 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 KREMEN2Q8NCW0 462 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 SYAP1Q96A49 352 aaPredicted RBP23.72■■□□□ 1.39
TRIM65-202ENST00000540128 RTP3Q9BQQ7 232 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 TMEM8AQ9HCN3 771 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 TMEM63CQ9P1W3 806 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 DACH1Q9UI36 760 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 FBXW11Q9UKB1 542 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 MAFFQ9ULX9 164 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 L1RE1Q9UN81 338 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 SNX9Q9Y5X1 595 aa23.72■■□□□ 1.39
TRIM65-202ENST00000540128 FGFR1OPO95684 399 aaKnown RBP23.71■■□□□ 1.39
TRIM65-202ENST00000540128 GCLMP48507 274 aa23.71■■□□□ 1.39
TRIM65-202ENST00000540128 MARSP56192 900 aaKnown RBP23.71■■□□□ 1.39
TRIM65-202ENST00000540128 SMAD4Q13485 552 aaKnown RBP23.71■■□□□ 1.39
TRIM65-202ENST00000540128 TPGS2Q68CL5 300 aa23.71■■□□□ 1.39
TRIM65-202ENST00000540128 ELMSAN1Q6PJG2 1045 aa23.71■■□□□ 1.39
TRIM65-202ENST00000540128 CMASQ8NFW8 434 aaPredicted RBP23.71■■□□□ 1.39
TRIM65-202ENST00000540128 TAF4BQ92750 862 aa23.71■■□□□ 1.39
TRIM65-202ENST00000540128 SRRTQ9BXP5 876 aaKnown RBP23.71■■□□□ 1.39
TRIM65-202ENST00000540128 RHOBTB2Q9BYZ6 727 aa23.71■■□□□ 1.39
TRIM65-202ENST00000540128 ADAM7Q9H2U9 754 aa23.71■■□□□ 1.39
TRIM65-202ENST00000540128 MAN1C1Q9NR34 630 aa23.71■■□□□ 1.39
TRIM65-202ENST00000540128 GRXCR2A6NFK2 248 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 GABRDO14764 452 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 BMP1P13497 986 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 ITIH3Q06033 890 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 SGSM1Q2NKQ1 1148 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 UVSSAQ2YD98 709 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 KRT39Q6A163 491 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 THEM5Q8N1Q8 247 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 SUSD6Q92537 303 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 SLC35C1Q96A29 364 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 SFXN1Q9H9B4 322 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 MTCL1Q9Y4B5 1905 aaKnown RBP23.7■■□□□ 1.38
TRIM65-202ENST00000540128 EYSQ5T1H1 3165 aa23.7■■□□□ 1.38
TRIM65-202ENST00000540128 WDR27A2RRH5 827 aa23.69■■□□□ 1.38
TRIM65-202ENST00000540128 MBTPS2O43462 519 aa23.69■■□□□ 1.38
TRIM65-202ENST00000540128 SPATA31D3P0C874 917 aa23.69■■□□□ 1.38
TRIM65-202ENST00000540128 ATF2P15336 505 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms