RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 LSAMPQ13449 338 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 GNA13Q14344 377 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 SKIDA1Q1XH10 827 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 LACTB2Q53H82 288 aaPredicted RBP13.32□□□□□ -0.28
DDX55-206ENST00000539934 HSP90AA4PQ58FG1 418 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 METTL11BQ5VVY1 283 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 FAM160B2Q86V87 743 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 LSMEM1Q8N8F7 131 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 SLC39A13Q96H72 371 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 SH3GL2Q99962 352 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 ERP44Q9BS26 406 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 KBTBD4Q9NVX7 518 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 TRAF3IP3Q9Y228 551 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 A0A1W2PQ67 120 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 EIF2S1P05198 315 aaKnown RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 CSTF2P33240 577 aaKnown RBP eCLIP13.31□□□□□ -0.28
DDX55-206ENST00000539934 NR2C2P49116 596 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 ELF3P78545 371 aaPredicted RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 SKOR1P84550 965 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 CACNB2Q08289 660 aaPredicted RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 ZNF658Q5TYW1 1059 aaPredicted RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 KRT79Q5XKE5 535 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 TTPALQ9BTX7 342 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 MIS12Q9H081 205 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 HAUS2Q9NVX0 235 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 HMGXB4Q9UGU5 601 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 PNMA3Q9UL41 463 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 CHMP2BQ9UQN3 213 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 SAMM50Q9Y512 469 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 DOCK1Q14185 1865 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 REV3LO60673 3130 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 PHACTR2O75167 634 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 OXSR1O95747 527 aaPredicted RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 SSBP05455 408 aaKnown RBP eCLIP13.31□□□□□ -0.28
DDX55-206ENST00000539934 CTRB1P17538 263 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 SP100P23497 879 aaPredicted RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 BLVRAP53004 296 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 STX17P56962 302 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 ARHGAP4P98171 946 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 PPP2R3AQ06190 1150 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 TBL3Q12788 808 aaKnown RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 CTRB2Q6GPI1 263 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 CCDC81Q6ZN84 652 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 C7orf57Q8NEG2 295 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 SNX29Q8TEQ0 813 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 LENG1Q96BZ8 264 aaPredicted RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 AIFM2Q9BRQ8 373 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 SENP6Q9GZR1 1112 aaPredicted RBP13.31□□□□□ -0.28
DDX55-206ENST00000539934 SIRT5Q9NXA8 310 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 CTNNAL1Q9UBT7 734 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 FAM184BQ9ULE4 1060 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 PCDHA12Q9UN75 941 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 SNX9Q9Y5X1 595 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 COMMD3-BMI1R4GMX3 469 aa13.31□□□□□ -0.28
DDX55-206ENST00000539934 PPP1R3GB7ZBB8 358 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 KLHL41O60662 606 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 PLA2G6O60733 806 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 SERPINB7O75635 380 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 CDK4P11802 303 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 GSTT1P30711 240 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 HOXA13P31271 388 aaPredicted RBP13.3□□□□□ -0.28
DDX55-206ENST00000539934 SERPINB6P35237 376 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 MRPS25P82663 173 aaKnown RBP13.3□□□□□ -0.28
DDX55-206ENST00000539934 ITGB3BPQ13352 177 aaPredicted RBP13.3□□□□□ -0.28
DDX55-206ENST00000539934 NFE2L1Q14494 772 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
DDX55-206ENST00000539934 SNX30Q5VWJ9 437 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 ANO7Q6IWH7 933 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 LRRC15Q8TF66 581 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 HAS1Q92839 578 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 PTPRN2Q92932 1015 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 HIC2Q96JB3 615 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 SAMD11Q96NU1 681 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 P2RX7Q99572 595 aaKnown RBP13.3□□□□□ -0.28
DDX55-206ENST00000539934 CEP44Q9C0F1 390 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 TRPV6Q9H1D0 765 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 IMPACTQ9P2X3 320 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 RAPGEFL1Q9UHV5 662 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 CTNND2Q9UQB3 1225 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 MRPL11Q9Y3B7 192 aaKnown RBP13.3□□□□□ -0.28
DDX55-206ENST00000539934 PLXNB2O15031 1838 aa13.3□□□□□ -0.28
DDX55-206ENST00000539934 SPDYE16A6NNV3 312 aaPredicted RBP13.29□□□□□ -0.28
DDX55-206ENST00000539934 SEC24DO94855 1032 aaPredicted RBP13.29□□□□□ -0.28
DDX55-206ENST00000539934 CFBP00751 764 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 CCND1P24385 295 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 MTMR2Q13614 643 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 NR1D2Q14995 579 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 ADRM1Q16186 407 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 Q3C1V9 767 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 E4F1Q66K89 784 aaPredicted RBP13.29□□□□□ -0.28
DDX55-206ENST00000539934 MOXD1Q6UVY6 613 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 CADM3Q8N126 398 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 NSMCE3Q96MG7 304 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 MED15Q96RN5 788 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 PORCNQ9H237 461 aa13.29□□□□□ -0.28
DDX55-206ENST00000539934 CCDC177Q9NQR7 707 aaPredicted RBP13.29□□□□□ -0.28
DDX55-206ENST00000539934 SAMSN1Q9NSI8 373 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms