RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CLCN1P35523 988 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
VTN-202ENST00000539746 TUBB4BP68371 445 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 FPGSQ05932 587 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 AGMOQ6ZNB7 445 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 TMEM139Q8IV31 216 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 IPO4Q8TEX9 1081 aaKnown RBP12.57□□□□□ -0.4
VTN-202ENST00000539746 TMEM176AQ96HP8 235 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 PPP1R12CQ9BZL4 782 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 KCNF1Q9H3M0 494 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 IL23AQ9NPF7 189 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 SPTLC3Q9NUV7 552 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 WDR35Q9P2L0 1181 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 ADAMTS1Q9UHI8 967 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 SIX4Q9UIU6 781 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 SSX2IPQ9Y2D8 614 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 HES2Q9Y543 173 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 PAXBP1Q9Y5B6 917 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 ADGRG1Q9Y653 693 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 SF3B1O75533 1304 aaKnown RBP eCLIP12.57□□□□□ -0.4
VTN-202ENST00000539746 H7C4K7 107 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 SYN3O14994 580 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 EPHB6O15197 1021 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 THAP12O43422 761 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 B3GAT3O94766 335 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 WARSP23381 471 aaKnown RBP12.56□□□□□ -0.4
VTN-202ENST00000539746 GNL1P36915 607 aaPredicted RBP12.56□□□□□ -0.4
VTN-202ENST00000539746 ASPAP45381 313 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
VTN-202ENST00000539746 SCNN1GP51170 649 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 LILRA4P59901 499 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 TSPY1Q01534 308 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 LRRC26Q2I0M4 334 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 HGSNATQ68CP4 663 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 WDR59Q6PJI9 974 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 ZDHHC17Q8IUH5 632 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 ARHGEF19Q8IW93 802 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 TMEM192Q8IY95 271 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 ADGRF2Q8IZF7 708 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 KIF18AQ8NI77 898 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 PHOSPHO2Q8TCD6 241 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 EPS8L1Q8TE68 723 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 PPP1R13LQ8WUF5 828 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 SECISBP2LQ93073 1101 aaKnown RBP12.56□□□□□ -0.4
VTN-202ENST00000539746 PI4K2AQ9BTU6 479 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 LHX5Q9H2C1 402 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 KLK14Q9P0G3 267 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 ARHGAP20Q9P2F6 1191 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 UVRAGQ9P2Y5 699 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 PUF60Q9UHX1 559 aaKnown RBP12.56□□□□□ -0.4
VTN-202ENST00000539746 NAGPAQ9UK23 515 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 PCDHGC3Q9UN70 934 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 INPP5FQ9Y2H2 1132 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 PCDHA13Q9Y5I0 950 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 PTPRJQ12913 1337 aa12.56□□□□□ -0.4
VTN-202ENST00000539746 A8MXQ7 604 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 CYB561D2O14569 222 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 CYP26A1O43174 497 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 SART1O43290 800 aaKnown RBP12.55□□□□□ -0.4
VTN-202ENST00000539746 CILPO75339 1184 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 TADA2AO75478 443 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 CST3P01034 146 aaPredicted RBP12.55□□□□□ -0.4
VTN-202ENST00000539746 TMEM253P0C7T8 217 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 CD19P15391 556 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 LAG3P18627 525 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 CYP2C18P33260 490 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 ACADSBP45954 432 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 NAP1L1P55209 391 aaKnown RBP12.55□□□□□ -0.4
VTN-202ENST00000539746 CCL23P55773 120 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 UPP1Q16831 310 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 DPY19L2P1Q6NXN4 242 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.55□□□□□ -0.4
VTN-202ENST00000539746 GPR65Q8IYL9 337 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 CMTR2Q8IYT2 770 aaKnown RBP12.55□□□□□ -0.4
VTN-202ENST00000539746 DCP1BQ8IZD4 617 aaKnown RBP12.55□□□□□ -0.4
VTN-202ENST00000539746 OR6B3Q8NGW1 331 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 TATDN2Q93075 761 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 HEXIM2Q96MH2 286 aaKnown RBP12.55□□□□□ -0.4
VTN-202ENST00000539746 KREMEN1Q96MU8 473 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 SLC9A7Q96T83 725 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 SYNCQ9H7C4 482 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 EHD2Q9NZN4 543 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 TUBGCP4Q9UGJ1 667 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 CDH9Q9ULB4 789 aa12.55□□□□□ -0.4
VTN-202ENST00000539746 PTGESO14684 152 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 PJA2O43164 708 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 FGBP02675 491 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 CD58P19256 250 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
VTN-202ENST00000539746 ZNF132P52740 706 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 GPC5P78333 572 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
VTN-202ENST00000539746 MBTPS1Q14703 1052 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 CNGA2Q16280 664 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 NFE2Q16621 373 aaPredicted RBP12.54□□□□□ -0.4
VTN-202ENST00000539746 GLRA4Q5JXX5 417 aa12.54□□□□□ -0.4
VTN-202ENST00000539746 C4orf50Q6ZRC1 276 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms