RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 LRRC63Q05C16 580 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 RAB33AQ14088 237 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 DPCR1Q3MIW9 517 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 SV2CQ496J9 727 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 RARS2Q5T160 578 aaKnown RBP16.96■□□□□ 0.31
RPAIN-206ENST00000539417 PTCRAQ6ISU1 281 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-206ENST00000539417 SLC8B1Q6J4K2 584 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 PPFIBP1Q86W92 1011 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 OSTM1Q86WC4 334 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 SMRP1Q8NCR6 262 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 APPL2Q8NEU8 664 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 OR10T2Q8NGX3 314 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 HPDLQ96IR7 371 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 ZNF560Q96MR9 790 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 NECAB3Q96P71 396 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-206ENST00000539417 TSG101Q99816 390 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 GTPBP4Q9BZE4 634 aaKnown RBP16.96■□□□□ 0.31
RPAIN-206ENST00000539417 XYLT2Q9H1B5 865 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 SNX9Q9Y5X1 595 aa16.96■□□□□ 0.31
RPAIN-206ENST00000539417 CYP11A1P05108 521 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 ODC1P11926 461 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 TYMPP19971 482 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 GCLMP48507 274 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 FKBP3Q00688 224 aaKnown RBP16.95■□□□□ 0.3
RPAIN-206ENST00000539417 STIM1Q13586 685 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 OVOS1Q6IE37 1185 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 TMC5Q6UXY8 1006 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 C15orf39Q6ZRI6 1047 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 SV2AQ7L0J3 742 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 PDCL2Q8N4E4 241 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 KREMEN2Q8NCW0 462 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 MMRN2Q9H8L6 949 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.95■□□□□ 0.35e-6■■■■□ 23.1
RPAIN-206ENST00000539417 TMEM63CQ9P1W3 806 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 FBXW11Q9UKB1 542 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 POLIQ9UNA4 740 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 USP15Q9Y4E8 981 aaPredicted RBP16.95■□□□□ 0.3
RPAIN-206ENST00000539417 NME7Q9Y5B8 376 aa16.95■□□□□ 0.3
RPAIN-206ENST00000539417 MTCL1Q9Y4B5 1905 aaKnown RBP16.95■□□□□ 0.3
RPAIN-206ENST00000539417 SEC24AO95486 1093 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 PNPLA4P41247 253 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 MCCD1P59942 119 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-206ENST00000539417 CREMQ03060 361 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 PAK1Q13153 545 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 BIRC3Q13489 604 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 CCDC142Q17RM4 750 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 SOWAHAQ2M3V2 549 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 ZACNQ401N2 412 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 ZNF280DQ6N043 979 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 PDXDC1Q6P996 788 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 RNF19BQ6ZMZ0 732 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 RBM43Q6ZSC3 357 aaKnown RBP16.94■□□□□ 0.3
RPAIN-206ENST00000539417 GDAP2Q9NXN4 497 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 C2orf16Q68DN1 1984 aa16.94■□□□□ 0.3
RPAIN-206ENST00000539417 H7C4K7 107 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 ABLIM3O94929 683 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 NLRP12P59046 1061 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 SMAD4Q13485 552 aaKnown RBP16.93■□□□□ 0.3
RPAIN-206ENST00000539417 INTS8Q75QN2 995 aaKnown RBP16.93■□□□□ 0.3
RPAIN-206ENST00000539417 LIMS2Q7Z4I7 341 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 USP37Q86T82 979 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 KBTBD7Q8WVZ9 684 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 SUSD6Q92537 303 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 ZNF707Q96C28 371 aaPredicted RBP16.93■□□□□ 0.3
RPAIN-206ENST00000539417 PGLYRP2Q96PD5 576 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 MKNK1Q9BUB5 465 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 CRISPLD1Q9H336 500 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 FSD2A1L4K1 749 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 PHACTR2O75167 634 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 EPB41P11171 864 aaKnown RBP16.93■□□□□ 0.3
RPAIN-206ENST00000539417 KRT13P13646 458 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 ACAT1P24752 427 aaKnown RBP16.93■□□□□ 0.3
RPAIN-206ENST00000539417 PPP1R2P41236 205 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 NCOA4Q13772 614 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 TJAP1Q5JTD0 557 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 SPOPLQ6IQ16 392 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 LRRTM3Q86VH5 581 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 TAS1R2Q8TE23 839 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
RPAIN-206ENST00000539417 DZANK1Q9NVP4 752 aa16.93■□□□□ 0.3
RPAIN-206ENST00000539417 CCDC195A0A1B0GUA6 201 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 IKBKBO14920 756 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 SLC16A3O15427 465 aaKnown RBP16.92■□□□□ 0.3
RPAIN-206ENST00000539417 MBD3O95983 291 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 HLA-DRAP01903 254 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 SRGAP2BP0DMP2 458 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 HOXB8P17481 243 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-206ENST00000539417 PAX3P23760 479 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 TRPC3Q13507 836 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 SMAD2Q15796 467 aaKnown RBP16.92■□□□□ 0.3
RPAIN-206ENST00000539417 AAK1Q2M2I8 961 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 CBWD6Q4V339 395 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 DCAF17Q5H9S7 520 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-206ENST00000539417 CBWD3Q5JTY5 395 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 CBWD5Q5RIA9 395 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 FILIP1Q7Z7B0 1213 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 TTC9BQ8N6N2 239 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 MLKLQ8NB16 471 aa16.92■□□□□ 0.3
RPAIN-206ENST00000539417 ZNF461Q8TAF7 563 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms