RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 RNF43Q68DV7 783 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 PSAPL1Q6NUJ1 521 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 GAREM2Q75VX8 874 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 USP37Q86T82 979 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 BPIFB1Q8TDL5 484 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 PSMG2Q969U7 264 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 ZC3H10Q96K80 434 aaKnown RBP15.39■□□□□ 0.05
PBX3-212ENST00000538998 LRRC3BQ96PB8 259 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 PGLYRP2Q96PD5 576 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 TMEM209Q96SK2 561 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 MKNK1Q9BUB5 465 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 ATXN3LQ9H3M9 355 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 THG1LQ9NWX6 298 aaKnown RBP15.39■□□□□ 0.05
PBX3-212ENST00000538998 ARHGAP28Q9P2N2 729 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 SLC8A2Q9UPR5 921 aa15.39■□□□□ 0.05
PBX3-212ENST00000538998 RBM19Q9Y4C8 960 aaKnown RBP15.39■□□□□ 0.05
PBX3-212ENST00000538998 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.39■□□□□ 0.05
PBX3-212ENST00000538998 ABLIM1O14639 778 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 OR4Q2P0C623 313 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 CCT6AP40227 531 aaKnown RBP15.38■□□□□ 0.05
PBX3-212ENST00000538998 PXNP49023 591 aaPredicted RBP15.38■□□□□ 0.05
PBX3-212ENST00000538998 MCM2P49736 904 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 TNK2Q07912 1038 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 GPR158Q5T848 1215 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 UNQ6494/PRO21346Q6UXR6 183 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 TAS1R3Q7RTX0 852 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 ITIH5Q86UX2 942 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 GPIHBP1Q8IV16 184 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 CAMKK1Q8N5S9 505 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 CRISPLD1Q9H336 500 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 KMT5AQ9NQR1 393 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 TUBGCP4Q9UGJ1 667 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 CEP295Q9C0D2 2601 aa15.38■□□□□ 0.05
PBX3-212ENST00000538998 CNOT1A5YKK6 2376 aaKnown RBP15.38■□□□□ 0.05
PBX3-212ENST00000538998 FAM208BQ5VWN6 2430 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 TRIP11Q15643 1979 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 MEFVO15553 781 aaPredicted RBP15.37■□□□□ 0.05
PBX3-212ENST00000538998 TOM1L1O75674 476 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 PRAMEF12O95522 483 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 HARSP12081 509 aaKnown RBP15.37■□□□□ 0.05
PBX3-212ENST00000538998 GABRR2P28476 465 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
PBX3-212ENST00000538998 GRSF1Q12849 480 aaKnown RBP eCLIP15.37■□□□□ 0.05
PBX3-212ENST00000538998 COL9A2Q14055 689 aaPredicted RBP15.37■□□□□ 0.05
PBX3-212ENST00000538998 MYBPC2Q14324 1141 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 NOLC1Q14978 699 aaKnown RBP eCLIP15.37■□□□□ 0.05
PBX3-212ENST00000538998 SLC10A6Q3KNW5 377 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 TMEM196Q5HYL7 178 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 CENPPQ6IPU0 288 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 PKN3Q6P5Z2 889 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 DNAJB7Q7Z6W7 309 aaPredicted RBP15.37■□□□□ 0.05
PBX3-212ENST00000538998 DRC1Q96MC2 740 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 SMOC1Q9H4F8 434 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 HSFX1Q9UBD0 423 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 ZMIZ1Q9ULJ6 1067 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 KIAA1024Q9UPX6 916 aa15.37■□□□□ 0.05
PBX3-212ENST00000538998 TIMM13Q9Y5L4 95 aaPredicted RBP15.37■□□□□ 0.05
PBX3-212ENST00000538998 MTMR11A4FU01 709 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 C1QTNF9BB2RNN3 333 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 C1QTNF9P0C862 333 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 LRPAP1P30533 357 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 AARSP49588 968 aaKnown RBP eCLIP15.36■□□□□ 0.05
PBX3-212ENST00000538998 NOVA1P51513 510 aaKnown RBP15.36■□□□□ 0.05
PBX3-212ENST00000538998 FOSBP53539 338 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 SAFBQ15424 915 aaKnown RBP eCLIP15.36■□□□□ 0.05
PBX3-212ENST00000538998 ELF2Q15723 593 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 ECM1Q16610 540 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 PLK5Q496M5 336 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 OVOS1Q6IE37 1185 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 NSUN7Q8NE18 718 aaKnown RBP15.36■□□□□ 0.05
PBX3-212ENST00000538998 GTF3C6Q969F1 213 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 GCNAQ96QF7 691 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 EDEM2Q9BV94 578 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 TASP1Q9H6P5 420 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 C17orf75Q9HAS0 396 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 PLEKHA5Q9HAU0 1116 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 DDX19AQ9NUU7 478 aaKnown RBP15.36■□□□□ 0.05
PBX3-212ENST00000538998 ANKFY1Q9P2R3 1169 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 ZMYM5Q9UJ78 669 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 SLC27A5Q9Y2P5 690 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 STK24Q9Y6E0 443 aa15.36■□□□□ 0.05
PBX3-212ENST00000538998 BAHCC1Q9P281 2608 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 TMEM8BA6NDV4 472 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 TRDMT1O14717 391 aaKnown RBP15.35■□□□□ 0.05
PBX3-212ENST00000538998 HIP1RO75146 1068 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 TYMPP19971 482 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 CYP3A5P20815 502 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 CDC25CP30307 473 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.05
PBX3-212ENST00000538998 AMPD2Q01433 879 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 STRN3Q13033 797 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 VEPH1Q14D04 833 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 KARSQ15046 597 aaKnown RBP15.35■□□□□ 0.05
PBX3-212ENST00000538998 TCEAL6Q6IPX3 200 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 FSTL4Q6MZW2 842 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 ARMCX5Q6P1M9 558 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 DSTYKQ6XUX3 929 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 DAW1Q8N136 415 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 NECAB1Q8N987 351 aa15.35■□□□□ 0.05
PBX3-212ENST00000538998 KDF1Q8NAX2 398 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms