RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 APBA1Q02410 837 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 TUSC3Q13454 348 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 RAB30Q15771 203 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 SLC10A6Q3KNW5 377 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 WSCD1Q658N2 575 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 GJB7Q6PEY0 223 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 TMC5Q6UXY8 1006 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 AGMOQ6ZNB7 445 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 ACOT1Q86TX2 421 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 SPATA2LQ8IUW3 424 aaPredicted RBP9.37□□□□□ -0.91
GGA3-202ENST00000538886 SENP8Q96LD8 212 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 GIT1Q9Y2X7 761 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 LUC7L2Q9Y383 392 aaKnown RBP9.37□□□□□ -0.91
GGA3-202ENST00000538886 KNL1Q8NG31 2342 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 A0A0B4J269 797 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 PPP1R3GB7ZBB8 358 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 TGFB1I1O43294 461 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 GFPT2O94808 682 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 KIF4AO95239 1232 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 IL18RAPO95256 599 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 GCKP35557 465 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 COPB1P53618 953 aaKnown RBP9.37□□□□□ -0.91
GGA3-202ENST00000538886 CYP24A1Q07973 514 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 KRT31Q15323 416 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 SDHAF4Q5VUM1 108 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 BHMTQ93088 406 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 TGS1Q96RS0 853 aaKnown RBP9.37□□□□□ -0.91
GGA3-202ENST00000538886 XPO4Q9C0E2 1151 aaKnown RBP9.37□□□□□ -0.91
GGA3-202ENST00000538886 ZNF576Q9H609 170 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 MIOSQ9NXC5 875 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 IGKV6-21A0A0C4DH24 114 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 TMEM110-MUSTN1A8MSY1 372 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 SLC26A4O43511 780 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 SLC9A1P19634 815 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 RFC2P35250 354 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 MAN2A1Q16706 1144 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 KYAT1Q16773 422 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 PTPROQ16827 1216 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 ELMOD1Q8N336 334 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 ZNF512Q96ME7 567 aaPredicted RBP9.37□□□□□ -0.91
GGA3-202ENST00000538886 SLC9A7Q96T83 725 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 PAIP2Q9BPZ3 127 aaKnown RBP9.37□□□□□ -0.91
GGA3-202ENST00000538886 MIS12Q9H081 205 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 LRRC4Q9HBW1 653 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
GGA3-202ENST00000538886 MYH9P35579 1960 aaKnown RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 TRIP12Q14669 1992 aaPredicted RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 KPNA7A9QM74 516 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 GOLGA8SH3BPF8 625 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 H3BQ06 376 aaPredicted RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 FGF18O76093 207 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 LRG1P02750 347 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 ABCB4P21439 1286 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 ADSSP30520 456 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 RGS7P49802 495 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 SV2CQ496J9 727 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 FOXR1Q6PIV2 292 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 GIPC2Q8TF65 315 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 HVCN1Q96D96 273 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 C11orf84Q9BUA3 381 aaPredicted RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 INTS13Q9NVM9 706 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 DDX43Q9NXZ2 648 aaKnown RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 ARHGEF37A1IGU5 675 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 KIAA0754O94854 1291 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 EOMESO95936 686 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 ODC1P11926 461 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 LAG3P18627 525 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 GBP2P32456 591 aaPredicted RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 NRIP1P48552 1158 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 ZNF75DP51815 510 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 CLNS1AP54105 237 aaKnown RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 ADKP55263 362 aaKnown RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 SLC39A12Q504Y0 691 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 TCP11X2Q5H9J9 407 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 SPRED2Q7Z698 418 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 TADA2BQ86TJ2 420 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 RTN4RL1Q86UN2 441 aaPredicted RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 TOP1MTQ969P6 601 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 PCDHGC5Q9Y5F6 944 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.36□□□□□ -0.915e-7■■■□□ 15.3
GGA3-202ENST00000538886 SF3B1O75533 1304 aaKnown RBP eCLIP9.36□□□□□ -0.916e-8■■■■■ 80.2
GGA3-202ENST00000538886 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 N4BP1O75113 896 aaKnown RBP9.36□□□□□ -0.91
GGA3-202ENST00000538886 CAND2O75155 1236 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 CALCAP01258 141 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 MYL4P12829 197 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 TNFAIP3P21580 790 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 BMP6P22004 513 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 KCNA5P22460 613 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 GRM5P41594 1212 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 ALDH1A3P47895 512 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 SLC11A1P49279 550 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 MFAP3P55082 362 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 GRIK3Q13003 919 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 BRSK2Q8IWQ3 736 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 GOLGA1Q92805 767 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 EXOC4Q96A65 974 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 PBX4Q9BYU1 374 aa9.36□□□□□ -0.91
GGA3-202ENST00000538886 NRDE2Q9H7Z3 1164 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms