RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 TRPV1Q8NER1 839 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 OR6J1Q8NGC5 347 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 CYP2W1Q8TAV3 490 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ABHD4Q8TB40 342 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 U2AF1L4Q8WU68 220 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 CRYGNQ8WXF5 182 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ANP32BQ92688 251 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 TNPO1Q92973 898 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ABHD8Q96I13 439 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 KIRREL1Q96J84 757 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 MAP6Q96JE9 813 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 FCRL2Q96LA5 508 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 SPATA33Q96N06 139 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 ZNF396Q96N95 335 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 RIT2Q99578 217 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 SENP7Q9BQF6 1050 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 RAB34Q9BZG1 259 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 KATNBL1Q9H079 304 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 AGO4Q9HCK5 861 aaKnown RBP4.82□□□□□ -1.64
SNHG1-208ENST00000538266 GPRC5CQ9NQ84 441 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 CYP26B1Q9NR63 512 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 PDGFCQ9NRA1 345 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 TBC1D22BQ9NU19 505 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 MTMR6Q9Y217 621 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 Q9Y3F1 56 aa4.82□□□□□ -1.64
SNHG1-208ENST00000538266 NFASCO94856 1347 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 SYNRGQ9UMZ2 1314 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 IGLV3-22A0A075B6J6 115 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 FAM221BA6H8Z2 402 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 FADS2P1A8MWK0 482 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 DDX39AO00148 427 aaKnown RBP4.81□□□□□ -1.64
SNHG1-208ENST00000538266 DNM1LO00429 736 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 TBX3O15119 743 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 FGF10O15520 208 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-208ENST00000538266 TBX1O43435 398 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 CHMP2AO43633 222 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 PSPNO60542 156 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 KPNA6O60684 536 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 FARP2O94887 1054 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-208ENST00000538266 ARIH2O95376 493 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 PGK1P00558 417 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 OR52Z1P0C646 297 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 ARP10275 920 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 KCNA2P16389 499 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 JUNBP17275 347 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-208ENST00000538266 CAPN2P17655 700 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 SFNP31947 248 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 RTP1P59025 263 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 PPP2R2AP63151 447 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 CEBPZQ03701 1054 aaKnown RBP4.81□□□□□ -1.64
SNHG1-208ENST00000538266 RESTQ13127 1097 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 SERINC3Q13530 473 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 PKP1Q13835 747 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 HSP90AA2PQ14568 343 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-208ENST00000538266 NR0B2Q15466 257 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 ZNF174Q15697 407 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 DGKDQ16760 1214 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 MTERF2Q49AM1 385 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 GJC2Q5T442 439 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-208ENST00000538266 EEF1DP3Q658K8 133 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 ATL3Q6DD88 541 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 CCDC62Q6P9F0 684 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 CLEC17AQ6ZS10 378 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 PPTC7Q8NI37 304 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 ERMNQ8TAM6 284 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 AFG1LQ8WV93 481 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 BTN2A2Q8WVV5 523 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 SLC5A5Q92911 643 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 LENG9Q96B70 501 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 SGSM3Q96HU1 749 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 CCDC140Q96MF4 163 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 FAM20AQ96MK3 541 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 PTCHD1Q96NR3 888 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 DEPDC7Q96QD5 511 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 UIMC1Q96RL1 719 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 TEKT3Q9BXF9 490 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 OSBPL2Q9H1P3 480 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 AZI2Q9H6S1 392 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 TTC12Q9H892 705 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-208ENST00000538266 ERVK13-1Q9NX77 482 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 SLC9A2Q9UBY0 812 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 PFDN2Q9UHV9 154 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 CFAP45Q9UL16 551 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 ZNF215Q9UL58 517 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-208ENST00000538266 PCDHA12Q9UN75 941 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 PCDHB6Q9Y5E3 794 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 BACE2Q9Y5Z0 518 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 FRMPD3Q5JV73 1810 aa4.81□□□□□ -1.64
SNHG1-208ENST00000538266 ELP1O95163 1332 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 A0A1W2PQ27 194 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 A0A1W2PQ45 241 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-208ENST00000538266 A0A1W2PQ64 194 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 A0A1W2PQC6 194 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 A0A1W2PQD8 194 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 A0A1W2PQY0 241 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 MSH4O15457 936 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ADCY6O43306 1168 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 ATP9AO75110 1047 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 PPFIA4O75335 1185 aa4.8□□□□□ -1.64
SNHG1-208ENST00000538266 PSMD10O75832 226 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms