RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 LPAR1Q92633 364 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 SLC7A6OSQ96CW6 309 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 RBM41Q96IZ5 413 aaKnown RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 PAIP2Q9BPZ3 127 aaKnown RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 OSBPL1AQ9BXW6 950 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ZNF341Q9BYN7 854 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 KIAA1683Q9H0B3 1180 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 SLC24A3Q9HC58 644 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 AGO4Q9HCK5 861 aaKnown RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 CYLDQ9NQC7 956 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 C1orf112Q9NSG2 853 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ANKEF1Q9NU02 776 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 GINM1Q9NU53 330 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 CCPG1Q9ULG6 757 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 PCDHB2Q9Y5E7 798 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 PARP14Q460N5 1801 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ARID2Q68CP9 1835 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 DHX15O43143 795 aaKnown RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 LIASO43766 372 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 SPAG7O75391 227 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ZWINTO95229 277 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ITGB5P18084 799 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 PTPN4P29074 926 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 YWHABP31946 246 aaKnown RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 RAD23BP54727 409 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 MORF4L2Q15014 288 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 TSNAXIP1Q2TAA8 658 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 FYB2Q5VWT5 728 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 SV2AQ7L0J3 742 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 GSTA5Q7RTV2 222 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 LONP2Q86WA8 852 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 MCF2L2Q86YR7 1114 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 TMEM161BQ8NDZ6 487 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 KCNV2Q8TDN2 545 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ASAP3Q8TDY4 903 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 CCDC127Q96BQ5 260 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 TUBB6Q9BUF5 446 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 PSMC3IPQ9P2W1 217 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 NKX1-2Q9UD57 310 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 RGS17Q9UGC6 210 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 HAO1Q9UJM8 370 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 UBIAD1Q9Y5Z9 338 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 DOCK1Q14185 1865 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 ATP2A1O14983 1001 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 TYROBPO43914 113 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 KRT15P19012 456 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 GARTP22102 1010 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 PTPN7P35236 360 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 BAG6P46379 1132 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 CCNHP51946 323 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-218ENST00000537641 TAS2R40P59535 323 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 MCL1Q07820 350 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 TNFAIP1Q13829 316 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 LBRQ14739 615 aaKnown RBP12.84□□□□□ -0.35
CPSF7-218ENST00000537641 ZC3H12AQ5D1E8 599 aaKnown RBP12.84□□□□□ -0.35
CPSF7-218ENST00000537641 HHATQ5VTY9 493 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-218ENST00000537641 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 GPD1LQ8N335 351 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 SPIRE2Q8WWL2 714 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 TBC1D10AQ9BXI6 508 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 KCNH7Q9NS40 1196 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 TOPORSQ9NS56 1045 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-218ENST00000537641 TBC1D22BQ9NU19 505 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 SHOC2Q9UQ13 582 aa12.84□□□□□ -0.35
CPSF7-218ENST00000537641 DRG1Q9Y295 367 aaKnown RBP12.84□□□□□ -0.35
CPSF7-218ENST00000537641 ASTN2O75129 1339 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-218ENST00000537641 HGSO14964 777 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-218ENST00000537641 ALOX15BO15296 676 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 SKAP2O75563 359 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-218ENST00000537641 T-ENOLP0DO92 83 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 TROVE2P10155 538 aaKnown RBP eCLIP12.83□□□□□ -0.36
CPSF7-218ENST00000537641 CNGA1P29973 690 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 JAK3P52333 1124 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 TGFB2P61812 414 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 PSMC5P62195 406 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 DMP1Q13316 513 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-218ENST00000537641 PKN2Q16513 984 aaKnown RBP12.83□□□□□ -0.36
CPSF7-218ENST00000537641 SGSM1Q2NKQ1 1148 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 C11orf91Q3C1V1 193 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 EFHC2Q5JST6 749 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 NAIF1Q69YI7 327 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-218ENST00000537641 PLEKHA7Q6IQ23 1121 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 C15orf39Q6ZRI6 1047 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 CENPUQ71F23 418 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 NLRP9Q7RTR0 991 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 PRUNE1Q86TP1 453 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 PHF13Q86YI8 300 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-218ENST00000537641 RCOR2Q8IZ40 523 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 SAMD3Q8N6K7 520 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 ALLCQ8N6M5 410 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 CLEC4DQ8WXI8 215 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms