RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 PRELID2Q8N945 189 aa18.58■□□□□ 0.56
SNX17-210ENST00000537606 FAM76AQ8TAV0 307 aa18.58■□□□□ 0.56
SNX17-210ENST00000537606 WHAMMQ8TF30 809 aa18.58■□□□□ 0.56
SNX17-210ENST00000537606 RNF19AQ9NV58 838 aa18.58■□□□□ 0.56
SNX17-210ENST00000537606 GOLGA6L10A0A0M3HER8 536 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 BHMG1C9JSJ3 638 aaPredicted RBP18.57■□□□□ 0.56
SNX17-210ENST00000537606 IL18RAPO95256 599 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 MYBL1P10243 752 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 PTP4A2Q12974 167 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 ZSCAN26Q16670 478 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 LIN9Q5TKA1 542 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 TRIM72Q6ZMU5 477 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 SLC5A4Q9NY91 659 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 USTQ9Y2C2 406 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 CEP350Q5VT06 3117 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 HOXD8P13378 290 aaPredicted RBP18.57■□□□□ 0.56
SNX17-210ENST00000537606 CTNNA2P26232 953 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 HIC1Q14526 733 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 TTC19Q6DKK2 380 aaPredicted RBP18.57■□□□□ 0.56
SNX17-210ENST00000537606 PHF13Q86YI8 300 aaPredicted RBP18.57■□□□□ 0.56
SNX17-210ENST00000537606 OR2W6PQ8NHA6 318 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 KAT2BQ92831 832 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 TRIM11Q96F44 468 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 SDCBP2Q9H190 292 aa18.57■□□□□ 0.56
SNX17-210ENST00000537606 GNEQ9Y223 722 aaKnown RBP18.57■□□□□ 0.56
SNX17-210ENST00000537606 BRCA2P51587 3418 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 SMIM10L2AP0DMW4 78 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 SMIM10L2BP0DMW5 78 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 CD19P15391 556 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 ACTN2P35609 894 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 RPL7AP62424 266 aaKnown RBP18.56■□□□□ 0.56
SNX17-210ENST00000537606 BEX3Q00994 111 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 DR1Q01658 176 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 CUL1Q13616 776 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 ZNF667Q5HYK9 610 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 FOXR1Q6PIV2 292 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 TLK2Q86UE8 772 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 MAGOHBQ96A72 148 aaKnown RBP18.56■□□□□ 0.56
SNX17-210ENST00000537606 SMYD3Q9H7B4 428 aa18.56■□□□□ 0.56
SNX17-210ENST00000537606 A6NJR5 290 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 TLR3O15455 904 aaKnown RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 OPA1O60313 960 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 POLR2BP30876 1174 aaKnown RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 GJC1P36383 396 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 SSR1P43307 286 aaKnown RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 LACTBP83111 547 aaPredicted RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 UAP1Q16222 522 aaPredicted RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 TTC27Q6P3X3 843 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 SLC13A5Q86YT5 568 aaPredicted RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 MREGQ8N565 214 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 WDTC1Q8N5D0 677 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 OSMRQ99650 979 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 HMGXB4Q9UGU5 601 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 PLAAQ9Y263 795 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 UTP11Q9Y3A2 253 aaKnown RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 A0A1B0GUA9 196 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 ZNF865P0CJ78 1059 aaPredicted RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 HSPA9P38646 679 aaKnown RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 ZNF200P98182 395 aaPredicted RBP18.55■□□□□ 0.56
SNX17-210ENST00000537606 RUFY4Q6ZNE9 571 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 TWNKQ96RR1 684 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 HES2Q9Y543 173 aa18.55■□□□□ 0.56
SNX17-210ENST00000537606 GOLGA8KD6RF30 607 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 RARAP10276 462 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 MMP8P22894 467 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 HSD17B3P37058 310 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 KCNJ1P48048 391 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 CYP4A22Q5TCH4 519 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 PLEKHA7Q6IQ23 1121 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 CXorf38Q8TB03 319 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 ACAP3Q96P50 834 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 AGAP1Q9UPQ3 857 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 NPTXRO95502 500 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 TAS2R40P59535 323 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 PPARDQ03181 441 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
SNX17-210ENST00000537606 TMEM132DQ14C87 1099 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 SKIDA1Q1XH10 827 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 DENND1BQ6P3S1 775 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 HERPUD2Q9BSE4 406 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 ADAMTS10Q9H324 1103 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 MRPL47Q9HD33 250 aaKnown RBP18.54■□□□□ 0.56
SNX17-210ENST00000537606 TJP2Q9UDY2 1190 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 PTPN22Q9Y2R2 807 aa18.54■□□□□ 0.56
SNX17-210ENST00000537606 PHF2O75151 1096 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 PROSCO94903 275 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 HOXA11P31270 313 aaPredicted RBP18.53■□□□□ 0.56
SNX17-210ENST00000537606 LRRC31Q6UY01 552 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 DPH6Q7L8W6 267 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 VCPIP1Q96JH7 1222 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 ADPGKQ9BRR6 497 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 EIF2AQ9BY44 585 aaKnown RBP18.53■□□□□ 0.56
SNX17-210ENST00000537606 RABEP2Q9H5N1 569 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 GPR32O75388 356 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 F2P00734 622 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 MYL3P08590 195 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 CYP2C9P11712 490 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 CCDC137Q6PK04 289 aaKnown RBP18.53■□□□□ 0.56
SNX17-210ENST00000537606 LEKR1Q6ZMV7 388 aa18.53■□□□□ 0.56
SNX17-210ENST00000537606 CATSPER4Q7RTX7 472 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms