RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 FTLP02792 175 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PIM1P11309 404 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 MYCLP12524 364 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ITGA8P53708 1063 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 TBL3Q12788 808 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 GPS1Q13098 491 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 P3H1Q32P28 736 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 CNPY1Q3B7I2 92 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 TPCN2Q8NHX9 752 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 NAT14Q8WUY8 206 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 BAP1Q92560 729 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 FAF2Q96CS3 445 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 DYNLL2Q96FJ2 89 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 BTBD6Q96KE9 485 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 RBM15Q96T37 977 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 MKNK1Q9BUB5 465 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 A8MUI8 341 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 HNRNPRO43390 633 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 SORBS3O60504 671 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ETS2P15036 469 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ECHS1P30084 290 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 GALCP54803 685 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 NR1H2P55055 460 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 TCEAL1Q15170 157 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 KCTD19Q17RG1 926 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PRPF39Q86UA1 669 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 TDRPQ86YL5 185 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 SAMD3Q8N6K7 520 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 FITM2Q8N6M3 262 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 SGF29Q96ES7 293 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PPP1R36Q96LQ0 422 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 UNKQ9C0B0 810 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 WNT8AQ9H1J5 351 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 KLHL11Q9NVR0 708 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 GID8Q9NWU2 228 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 POLIQ9UNA4 740 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ATP11BQ9Y2G3 1177 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF701M0R085 212 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 ABL1P00519 1130 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 MUTP22033 750 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 IFI35P80217 286 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 PFKFB3Q16875 520 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 TRIM16LQ309B1 348 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 METTL13Q8N6R0 699 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 EFHD2Q96C19 240 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 C18orf8Q96DM3 657 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 ING2Q9H160 280 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 CPVLQ9H3G5 476 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 TMEM260Q9NX78 707 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 GIN1Q9NXP7 522 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 SLC24A2Q9UI40 661 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 PNMA3Q9UL41 463 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 AFG3L2Q9Y4W6 797 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 NCANO14594 1321 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 NPHP3-ACAD11A0A0J9YXS1 232 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 TNFAIP8O95379 198 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 CBX6O95503 412 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 KCNA4P22459 653 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 GABPAQ06546 454 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 RINT1Q6NUQ1 792 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 PACS1Q6VY07 963 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 TMCO5AQ8N6Q1 288 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 MANSC1Q9H8J5 431 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 CHORDC1Q9UHD1 332 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 ZNHIT2Q9UHR6 403 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 C4AP0C0L4 1744 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 C4BP0C0L5 1744 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 TM9SF1O15321 606 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 SLC16A3O15427 465 aaKnown RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 PRPF4O43172 522 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 RIPK2O43353 540 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 UPP2O95045 317 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 MYL4P12829 197 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 RAP1GDS1P52306 607 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 PDK4Q16654 411 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 GJC2Q5T442 439 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 RNF220Q5VTB9 566 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 DPP8Q6V1X1 898 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 LRRC57Q8N9N7 239 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 C12orf50Q8NA57 414 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 RNF34Q969K3 372 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 CEP95Q96GE4 821 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 ABHD8Q96I13 439 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 STN1Q9H668 368 aaKnown RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 CAAP1Q9H8G2 361 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 HEY2Q9UBP5 337 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 APPL1Q9UKG1 709 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 AGAP1Q9UPQ3 857 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 RCCD1A6NED2 376 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 PDE8BO95263 885 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 ASMTLO95671 621 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 KRT8P05787 483 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 GAP43P17677 238 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 USP4Q13107 963 aa5.66□□□□□ -1.5
PTPRD-213ENST00000537002 CTTNQ14247 550 aaKnown RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 OASLQ15646 514 aaKnown RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 ZYXQ15942 572 aaKnown RBP5.66□□□□□ -1.5
PTPRD-213ENST00000537002 TBC1D9BQ66K14 1250 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms