RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 XYLT2Q9H1B5 865 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 KIAA1257Q9ULG3 409 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 TLR3O15455 904 aaKnown RBP14.42□□□□□ -0.1
SMG6-203ENST00000536871 SHOX2O60902 331 aaPredicted RBP14.42□□□□□ -0.1
SMG6-203ENST00000536871 STAG3L1P0CL83 205 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 HSD17B3P37058 310 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 MARCKSL1P49006 195 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 GSCP56915 257 aaPredicted RBP14.42□□□□□ -0.1
SMG6-203ENST00000536871 LACTBP83111 547 aaPredicted RBP14.42□□□□□ -0.1
SMG6-203ENST00000536871 SKOR1P84550 965 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 LMNB2Q03252 620 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 DCAF4L1Q3SXM0 396 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 SEZ6Q53EL9 994 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 SGO2Q562F6 1265 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 CEP128Q6ZU80 1094 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 BBOF1Q8ND07 529 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 TRAPPC12Q8WVT3 735 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 MAML3Q96JK9 1138 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 TINF2Q9BSI4 451 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 CELF4Q9BZC1 486 aaKnown RBP14.42□□□□□ -0.1
SMG6-203ENST00000536871 RASSF4Q9H2L5 321 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 ITGA11Q9UKX5 1188 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 PLAAQ9Y263 795 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 DERAQ9Y315 318 aa14.42□□□□□ -0.1
SMG6-203ENST00000536871 SNAI1O95863 264 aaPredicted RBP14.41□□□□□ -0.1
SMG6-203ENST00000536871 ASPAP45381 313 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 HNRNPH2P55795 449 aaKnown RBP14.41□□□□□ -0.1
SMG6-203ENST00000536871 SPRYD7Q5W111 196 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 DNAJC24Q6P3W2 148 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 MMS22LQ6ZRQ5 1243 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 ILDR2Q71H61 639 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 RCOR2Q8IZ40 523 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 C3orf20Q8ND61 904 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 CCHCR1Q8TD31 782 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 DDX27Q96GQ7 796 aaKnown RBP14.41□□□□□ -0.1
SMG6-203ENST00000536871 BTBD6Q96KE9 485 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 ATP6V1G3Q96LB4 118 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 TSPAN18Q96SJ8 248 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 ZNF408Q9H9D4 720 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 PLEKHA5Q9HAU0 1116 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 ERVK-5Q9HDB9 667 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 DDX56Q9NY93 547 aaKnown RBP14.41□□□□□ -0.1
SMG6-203ENST00000536871 WHRNQ9P202 907 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 NR2E1Q9Y466 385 aa14.41□□□□□ -0.1
SMG6-203ENST00000536871 A0A087WZ62 844 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 RARAP10276 462 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 ADCYAP1R1P41586 468 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 GYS2P54840 703 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 IGBP1P78318 339 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 DHX9Q08211 1270 aaKnown RBP14.4□□□□□ -0.1
SMG6-203ENST00000536871 CALCOCO2Q13137 446 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 ACVR2BQ13705 512 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 STILQ15468 1287 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 SIX1Q15475 284 aaPredicted RBP14.4□□□□□ -0.1
SMG6-203ENST00000536871 GRIK4Q16099 956 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 AMHR2Q16671 573 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 AGBL2Q5U5Z8 902 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 EEF1DP3Q658K8 133 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 HOOK3Q86VS8 718 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 ERICH1Q86X53 443 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 NIPA2Q8N8Q9 360 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 OR6J1Q8NGC5 347 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 FNIP1Q8TF40 1166 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 RIN2Q8WYP3 895 aaPredicted RBP14.4□□□□□ -0.1
SMG6-203ENST00000536871 PIK3R5Q8WYR1 880 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 C18orf8Q96DM3 657 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 FDXACB1Q9BRP7 624 aaPredicted RBP14.4□□□□□ -0.1
SMG6-203ENST00000536871 DPH5Q9H2P9 285 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 PDZD7Q9H5P4 517 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 ZDHHC18Q9NUE0 388 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 UMODL1Q5DID0 1318 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 A0A1B0GUA9 196 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 TMEM191CA6NGB0 347 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 SRRM3A6NNA2 597 aaPredicted RBP14.4□□□□□ -0.1
SMG6-203ENST00000536871 GPR25O00155 361 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 B4GALT5O43286 388 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 CAPN15O75808 1086 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 MMP3P08254 477 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 CXCL8P10145 99 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 ITIH2P19823 946 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 PTPN7P35236 360 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 CDR1P51861 262 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 TRADDQ15628 312 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 CCNG2Q16589 344 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 CEP85LQ5SZL2 805 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 KDM7AQ6ZMT4 941 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 DDX42Q86XP3 938 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMG6-203ENST00000536871 UBLCP1Q8WVY7 318 aaPredicted RBP14.4□□□□□ -0.1
SMG6-203ENST00000536871 NLRP7Q8WX94 980 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 ACAP3Q96P50 834 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 TRIM51Q9BSJ1 452 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 DNAI2Q9GZS0 605 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 PLEKHA4Q9H4M7 779 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 TMBIM4Q9HC24 238 aa14.4□□□□□ -0.1
SMG6-203ENST00000536871 CHORDC1Q9UHD1 332 aaPredicted RBP14.4□□□□□ -0.1
SMG6-203ENST00000536871 ZNF236Q9UL36 1845 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 NRCAMQ92823 1304 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 NUDT17P0C025 328 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 CD58P19256 250 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 RBP5P82980 135 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms