RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 USP38Q8NB14 1042 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 MTG1Q9BT17 334 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 GDF3Q9NR23 364 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 SCN5AQ14524 2016 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 OBSL1O75147 1896 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 C17orf102A2RUQ5 167 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 TNPO2O14787 897 aaKnown RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 CAND2O75155 1236 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 FTLP02792 175 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 TNFAIP3P21580 790 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 MMP8P22894 467 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 CALRP27797 417 aaKnown RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 ECHS1P30084 290 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 LRPAP1P30533 357 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 PTPN7P35236 360 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 ARID5AQ03989 594 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 ZNF252P-AS1Q0IIN9 211 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 TRIM32Q13049 653 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 GLE1Q53GS7 698 aaKnown RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 TAF2Q6P1X5 1199 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 TRMT1LQ7Z2T5 733 aaKnown RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 LRRC52Q8N7C0 313 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 SLC4A11Q8NBS3 891 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 RBBP8NLQ8NC74 664 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 SPATA4Q8NEY3 305 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 EIF2AQ9BY44 585 aaKnown RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 PARD6BQ9BYG5 372 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 CARD9Q9H257 536 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 ARFGAP3Q9NP61 516 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 GDAP2Q9NXN4 497 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 PCDHA3Q9Y5H8 950 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 BRCA2P51587 3418 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 CCDC151A5D8V7 595 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 TUBBP07437 444 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 EIF4BP23588 611 aaKnown RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 BRD3Q15059 726 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 SKIDA1Q1XH10 827 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 BEND6Q5SZJ8 279 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 CYP4F22Q6NT55 531 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 CC2D1AQ6P1N0 951 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 ZBTB33Q86T24 672 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 FAM228AQ86W67 206 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 MICALL1Q8N3F8 863 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 GSTCDQ8NEC7 633 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 PPP1R10Q96QC0 940 aaKnown RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 RPF1Q9H9Y2 349 aaKnown RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 CHRNA1P02708 482 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 PFKMP08237 780 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 TNNI1P19237 187 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CYP2B6P20813 491 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 PSMC4P43686 418 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 AARSP49588 968 aaKnown RBP eCLIP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 TAZQ16635 292 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 LHX8Q68G74 356 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 GDF6Q6KF10 455 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 GPIHBP1Q8IV16 184 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 TMEM130Q8N3G9 435 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 TFAP2BQ92481 460 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 SLCO2A1Q92959 643 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 ELMO3Q96BJ8 720 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 TRIM11Q96F44 468 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 GCOM2Q9BZD3 368 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CISHQ9NSE2 258 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 RNF186Q9NXI6 227 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 VPS18Q9P253 973 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CYTH4Q9UIA0 394 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 INO80B-WBP1J3KQ70 363 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CYP2C9P11712 490 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 FLT3LGP49771 235 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 ZNF200P98182 395 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 BEX3Q00994 111 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 WDR44Q5JSH3 913 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 NOTUMQ6P988 496 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 AENQ8WTP8 325 aaKnown RBP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 ANKRD36BP1Q96IX9 119 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 TSEN34Q9BSV6 310 aaKnown RBP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 INO80BQ9C086 356 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 ERVK-5Q9HDB9 667 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 MED4Q9NPJ6 270 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CHST12Q9NRB3 414 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 SRRDQ9UH36 339 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 AKT3Q9Y243 479 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 PLXNA4Q9HCM2 1894 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CTAGE15A4D2H0 777 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 AOC2O75106 756 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 TBC1D8O95759 1140 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CTAGE8P0CG41 777 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CCND3P30281 292 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 MRPS6P82932 125 aaKnown RBP8.52□□□□□ -1.05
COL21A1-212ENST00000535941 BNIPLQ7Z465 357 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CTAGE6Q86UF2 777 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 CTAGE4Q8IX94 777 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 ZDHHC14Q8IZN3 488 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 ZNF606Q8WXB4 792 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 ALG3Q92685 438 aa8.52□□□□□ -1.05
COL21A1-212ENST00000535941 MIF4GDA9UHW6 222 aaKnown RBP8.51□□□□□ -1.05
COL21A1-212ENST00000535941 FTCDO95954 541 aa8.51□□□□□ -1.05
COL21A1-212ENST00000535941 IGBP1P78318 339 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms