RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 VN1R3Q9BXE9 311 aa10.07□□□□□ -0.8
UBB-204ENST00000535788 MRPL4Q9BYD3 311 aaKnown RBP10.07□□□□□ -0.8
UBB-204ENST00000535788 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
UBB-204ENST00000535788 ZBP1Q9H171 429 aa10.07□□□□□ -0.8
UBB-204ENST00000535788 TMEM134Q9H6X4 195 aa10.07□□□□□ -0.8
UBB-204ENST00000535788 BLOC1S4Q9NUP1 217 aa10.07□□□□□ -0.8
UBB-204ENST00000535788 MARCH5Q9NX47 278 aa10.07□□□□□ -0.8
UBB-204ENST00000535788 TNFSF13BQ9Y275 285 aa10.07□□□□□ -0.8
UBB-204ENST00000535788 RBM19Q9Y4C8 960 aaKnown RBP10.07□□□□□ -0.8
UBB-204ENST00000535788 SRPRBQ9Y5M8 271 aaKnown RBP10.07□□□□□ -0.8
UBB-204ENST00000535788 EPG5Q9HCE0 2579 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 ZFHX4Q86UP3 3567 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.06□□□□□ -0.8
UBB-204ENST00000535788 FSD2A1L4K1 749 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 C2orf71A6NGG8 1288 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 PRSS47A8MTI9 375 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 CXCL14O95715 111 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 CTSAP10619 480 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 OAS2P29728 719 aaKnown RBP10.06□□□□□ -0.8
UBB-204ENST00000535788 SOX11P35716 441 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 TXLNAP40222 546 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 CBLBQ13191 982 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 LLGL2Q6P1M3 1020 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 GLYCTKQ8IVS8 523 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 TMEM161BQ8NDZ6 487 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 SPIRE2Q8WWL2 714 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 LARP4BQ92615 738 aaKnown RBP10.06□□□□□ -0.8
UBB-204ENST00000535788 EPSTI1Q96J88 318 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 TARS2Q9BW92 718 aaKnown RBP10.06□□□□□ -0.8
UBB-204ENST00000535788 CDT1Q9H211 546 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 COMMD8Q9NX08 183 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 DCAF16Q9NXF7 216 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 CCDC39Q9UFE4 941 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 XPO7Q9UIA9 1087 aaKnown RBP10.06□□□□□ -0.8
UBB-204ENST00000535788 GDAQ9Y2T3 454 aa10.06□□□□□ -0.8
UBB-204ENST00000535788 GVINP1Q7Z2Y8 2422 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 F8W810 466 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 DPYSL4O14531 572 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 PTGESO14684 152 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 ATP9BO43861 1147 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 CLASP2O75122 1294 aaKnown RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 TBCAO75347 108 aaKnown RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 FAM13AO94988 1023 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 ABL1P00519 1130 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 SRGAP2BP0DMP2 458 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 ZSCAN22P10073 491 aaPredicted RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 MAPTP10636 758 aaKnown RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 HARSP12081 509 aaKnown RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 NASPP49321 788 aaPredicted RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 SMTNP53814 917 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 STRN3Q13033 797 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 COASYQ13057 564 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 SLC39A14Q15043 492 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 STK38Q15208 465 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 PTPN14Q15678 1187 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 WDR45BQ5MNZ6 344 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 SNX32Q86XE0 403 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 ANKRD42Q8N9B4 389 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 ZFPM2Q8WW38 1151 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 RABGGTAQ92696 567 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 ZNF396Q96N95 335 aaPredicted RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 SPAG5Q96R06 1193 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 SRPK1Q96SB4 655 aaKnown RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 ACO2Q99798 780 aaKnown RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 NTPCRQ9BSD7 190 aaKnown RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 HERC2P3Q9BVR0 1158 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 NUCKS1Q9H1E3 243 aaKnown RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 CXCL16Q9H2A7 254 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 FANCLQ9NW38 375 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 LARSQ9P2J5 1176 aaKnown RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 ANKFY1Q9P2R3 1169 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 CACNG4Q9UBN1 327 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 STK17AQ9UEE5 414 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 TAGLN3Q9UI15 199 aa10.05□□□□□ -0.8
UBB-204ENST00000535788 MORC2Q9Y6X9 1032 aaPredicted RBP10.05□□□□□ -0.8
UBB-204ENST00000535788 EP300Q09472 2414 aaPredicted RBP10.04□□□□□ -0.8
UBB-204ENST00000535788 MYO10Q9HD67 2058 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 CASTOR2A6NHX0 329 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 TMEM110-MUSTN1A8MSY1 372 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 K7ENM7 598 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 ABLIM1O14639 778 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 F13A1P00488 732 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 SOD2P04179 222 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 URODP06132 367 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 MCF2P10911 925 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 PYGBP11216 843 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 NDUFV2P19404 249 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 PROZP22891 400 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 HOXC13P31276 330 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 GRM5P41594 1212 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 NCKAP1LP55160 1127 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 SNX16P57768 344 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 OSTNP61366 133 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 TUSC3Q13454 348 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 PKP1Q13835 747 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 KCNC3Q14003 757 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 GIT2Q14161 759 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 PUM1Q14671 1186 aaKnown RBP eCLIP10.04□□□□□ -0.8
UBB-204ENST00000535788 GLRA4Q5JXX5 417 aa10.04□□□□□ -0.8
UBB-204ENST00000535788 RRAGBQ5VZM2 374 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms