RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 CD52P31358 61 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 CXCR5P32302 372 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 CDK7P50613 346 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 CENPCQ03188 943 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 PDCD11Q14690 1871 aaKnown RBP22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 ZNF394Q53GI3 561 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 TRAF7Q6Q0C0 670 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 TRIM72Q6ZMU5 477 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 DAAM2Q86T65 1068 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 SYCE1Q8N0S2 351 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 MMS19Q96T76 1030 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 SDCBP2Q9H190 292 aa22.37■■□□□ 1.17
PDXDC1-205ENST00000535621 CTAGE15A4D2H0 777 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CYP1A2P05177 515 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CTAGE8P0CG41 777 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CKBP12277 381 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 RAP1GAPP47736 663 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CTCFP49711 727 aaPredicted RBP22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CDH8P55286 799 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 LPIN1Q14693 890 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 XKR4Q5GH76 650 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 GLRA4Q5JXX5 417 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 FBXO47Q5MNV8 452 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 TWF2Q6IBS0 349 aaKnown RBP22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CTAGE6Q86UF2 777 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CTAGE4Q8IX94 777 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CPA5Q8WXQ8 436 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 ANKRD7Q92527 254 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CRISPLD2Q9H0B8 497 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 PDCL3Q9H2J4 239 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 SMYD3Q9H7B4 428 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CTTNBP2NLQ9P2B4 639 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 MBTPS1Q14703 1052 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 NAA35Q5VZE5 725 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 FAM126BQ8IXS8 530 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 GOLGA1Q92805 767 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CALR3Q96L12 384 aaKnown RBP22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 ABCB6Q9NP58 842 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 TUBGCP4Q9UGJ1 667 aa22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 CHORDC1Q9UHD1 332 aaPredicted RBP22.36■■□□□ 1.17
PDXDC1-205ENST00000535621 PDE2AO00408 941 aaPredicted RBP22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 ATMINO43313 823 aaPredicted RBP22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 MTA2O94776 668 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 P4HA1P13674 534 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 NOMO3P69849 1222 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 C18orf25Q96B23 403 aaPredicted RBP22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 ARMC5Q96C12 935 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 ZNF653Q96CK0 615 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 ZSWIM1Q9BR11 485 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 CYP3A43Q9HB55 503 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 PARP2Q9UGN5 583 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 STXBP5LQ9Y2K9 1186 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 SCN1AP35498 2009 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 SMIM28A0A1B0GU29 152 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 PQBP1O60828 265 aaKnown RBP22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 CKAP4Q07065 602 aaKnown RBP22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 RPS6KA1Q15418 735 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 PEX26Q7Z412 305 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 NT5DC3Q86UY8 548 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 PASD1Q8IV76 773 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 MCOLN2Q8IZK6 566 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 BEST2Q8NFU1 509 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 KLK14Q9P0G3 267 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 PADI3Q9ULW8 664 aa22.35■■□□□ 1.17
PDXDC1-205ENST00000535621 SCN5AQ14524 2016 aa22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 MEIS3P2A8K0S8 358 aa22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 MGEA5O60502 916 aa22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 KIF4AO95239 1232 aa22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 KCNE1P15382 129 aa22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 SSTR3P32745 418 aaPredicted RBP22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 NSFP46459 744 aaKnown RBP22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 TEX35Q5T0J7 233 aa22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 WHAMMQ8TF30 809 aa22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 TSPAN18Q96SJ8 248 aa22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 CHST12Q9NRB3 414 aa22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 UBQLN1Q9UMX0 589 aaKnown RBP22.34■■□□□ 1.17
PDXDC1-205ENST00000535621 TET1Q8NFU7 2136 aa22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 BRD2P25440 801 aaKnown RBP22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 DNA2P51530 1060 aa22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 MYO1EQ12965 1108 aa22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 PTPROQ16827 1216 aa22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 MON1BQ7L1V2 547 aa22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 TFAP2BQ92481 460 aa22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 NUP85Q9BW27 656 aa22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 ERVK-5Q9HDB9 667 aa22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 PCDH10Q9P2E7 1040 aa22.33■■□□□ 1.17
PDXDC1-205ENST00000535621 PPEF2O14830 753 aa22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 CILPO75339 1184 aa22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 IBSPP21815 317 aaPredicted RBP22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 RAD23BP54727 409 aa22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 FAM26DQ5JW98 314 aa22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 CAGE1Q8TC20 777 aa22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 RABGGTAQ92696 567 aa22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 FAM124BQ9H5Z6 455 aaPredicted RBP22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 UVRAGQ9P2Y5 699 aa22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 CNOT8Q9UFF9 292 aaKnown RBP22.33■■□□□ 1.16
PDXDC1-205ENST00000535621 GPR182O15218 404 aa22.32■■□□□ 1.16
PDXDC1-205ENST00000535621 MYBL1P10243 752 aa22.32■■□□□ 1.16
PDXDC1-205ENST00000535621 TNNC1P63316 161 aa22.32■■□□□ 1.16
PDXDC1-205ENST00000535621 TUBB4BP68371 445 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms