RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SMNDC1O75940 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPG11-203ENST00000535302 ADRA2BP18089 450 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 IL10P22301 178 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 NPEPPSP55786 919 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 EXOSC10Q01780 885 aaKnown RBP13.22□□□□□ -0.29
SPG11-203ENST00000535302 C9orf72Q96LT7 481 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 ZNF512Q96ME7 567 aaPredicted RBP13.22□□□□□ -0.29
SPG11-203ENST00000535302 TAAR1Q96RJ0 339 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 MCM8Q9UJA3 840 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.22□□□□□ -0.29
SPG11-203ENST00000535302 PGM1P36871 562 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 GALCP54803 685 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 HDAC4P56524 1084 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 VSNL1P62760 191 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 ARHGAP17Q68EM7 881 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 TRAF7Q6Q0C0 670 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 DIS3LQ8TF46 1054 aaKnown RBP13.22□□□□□ -0.29
SPG11-203ENST00000535302 TNIP3Q96KP6 325 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 METTL5Q9NRN9 209 aaKnown RBP13.22□□□□□ -0.29
SPG11-203ENST00000535302 DPYDQ12882 1025 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 MAPRE1Q15691 268 aaKnown RBP13.22□□□□□ -0.29
SPG11-203ENST00000535302 ATPAF2Q8N5M1 289 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
SPG11-203ENST00000535302 RAB6BQ9NRW1 208 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 PNPLA7Q6ZV29 1317 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 WDR19Q8NEZ3 1342 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 NR3C2P08235 984 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 WEE1P30291 646 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 GRIN1Q05586 938 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 LONP2Q86WA8 852 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 CHMP2BQ9UQN3 213 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 FAM32AQ9Y421 112 aaKnown RBP13.22□□□□□ -0.29
SPG11-203ENST00000535302 CAPN1P07384 714 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 DPEP1P16444 411 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 KCNJ6P48051 423 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 FMO5P49326 533 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 CAV1Q03135 178 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 HORMAD1Q86X24 394 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 CELF4Q9BZC1 486 aaKnown RBP13.21□□□□□ -0.29
SPG11-203ENST00000535302 HACL1Q9UJ83 578 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 CAMTA2O94983 1202 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 CELF2O95319 508 aaKnown RBP13.21□□□□□ -0.29
SPG11-203ENST00000535302 KRT8P05787 483 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 CDC16Q13042 620 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 ANO5Q75V66 913 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 UXS1Q8NBZ7 420 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 ATP6V1G3Q96LB4 118 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 SPASTQ9UBP0 616 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 GSNP06396 782 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 ZRANB3Q5FWF4 1079 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 ELMO3Q96BJ8 720 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 EML4Q9HC35 981 aaKnown RBP13.21□□□□□ -0.29
SPG11-203ENST00000535302 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 ANO9A1A5B4 782 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 GRID2IPA4D2P6 1211 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 UBTFL6P0CB48 400 aaPredicted RBP13.21□□□□□ -0.29
SPG11-203ENST00000535302 PDHBP11177 359 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 HSD17B4P51659 736 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 ACTR2P61160 394 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 SGMS1Q86VZ5 419 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 TASP1Q9H6P5 420 aa13.21□□□□□ -0.29
SPG11-203ENST00000535302 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.29
SPG11-203ENST00000535302 ASAP2O43150 1006 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 NCALDP61601 193 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 DCAF6Q58WW2 860 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 SPATA4Q8NEY3 305 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 IPMKQ8NFU5 416 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 SENP7Q9BQF6 1050 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 KCNF1Q9H3M0 494 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 TRABDQ9H4I3 376 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 ZNF556Q9HAH1 456 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 MYOZ2Q9NPC6 264 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 NFIBO00712 420 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 GTF2H1P32780 548 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 ITPK1Q13572 414 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 PAN2Q504Q3 1202 aaKnown RBP13.21□□□□□ -0.3
SPG11-203ENST00000535302 ATF7IP2Q5U623 682 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 STRIP1Q5VSL9 837 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 ATG4CQ96DT6 458 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 THTPAQ9BU02 230 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 DONSONQ9NYP3 566 aa13.21□□□□□ -0.3
SPG11-203ENST00000535302 ENO4A6NNW6 628 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 PDXKO00764 312 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 GH1P01241 217 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 ITGA4P13612 1032 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 RASA1P20936 1047 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 EFNA5P52803 228 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 CCDC15Q0P6D6 951 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 TRIM69Q86WT6 500 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 PTPRHQ9HD43 1115 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 EHD2Q9NZN4 543 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 PREX2Q70Z35 1606 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 PLA2R1Q13018 1463 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 ALKQ9UM73 1620 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 ANTXR2P58335 489 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 SNAPC2Q13487 334 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 HASPINQ8TF76 798 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 CYFIP2Q96F07 1278 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms